Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4295 |
Symbol | |
ID | 5872102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4807971 |
End bp | 4808663 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549429 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001670519 |
Protein GI | 167035288 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.331314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAG TACGCACAGC GTTACCCCTG GTACTGCTCA CCAGTGTGTT GACTGGTTGT GCAGGTTTGC AAAAAACCGA CTGGCCGAAG TGTGCCGCCG TCGGGGGTGT AGGCGGCGCC GCCCTGGGCG CCATCGAGAG TTCCAGCTGG GCTGGCTGGG GCGCGTTGCT GGGCGGTGGC CTGGCGGCGG GCTATTGCTG GGCCCATGGC GATGGCGACG AGGATGGCGA CGGCGTGCCG GACAGCCGTG ACAAGTGCCC AGGCACCCCG CGTGGCGTGC AGGTCGATGC CAACGGATGC CCGCCAGAGC CGGCAGCGGT GGTCGAGGAA GTGGTGGTGC AGAAGGAAGA AGTCATCGTC ATCCGCGATG TGCACTTCGA GTTCGATTCT GCGCGTCTGA CCTCCAGCGA CAAAGAGCGC CTCAATACCA TTGCCACGCG CCTGAAGCAG GAAGCGCCAT CTGCCCGGCT GAGCGTCAGC GGCCATACCG ACAGTGTCGG CTCCGACAGC TACAACCAGA AACTGTCTGA GCGTCGCGCC CACTCGGTGA CCGATTACCT GGTCGAGAGC GGTGTACCGC GCAGGAGCTT CGTTTCGGTG GTCGGTGCCG GTGAAACCCA ACCGGTAGCT GACAATGCCA CGGCCGAAGG GCGTGCCATG AACCGTCGTA CCGAGATCAA GATCCAGCGG TGA
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Protein sequence | MSIVRTALPL VLLTSVLTGC AGLQKTDWPK CAAVGGVGGA ALGAIESSSW AGWGALLGGG LAAGYCWAHG DGDEDGDGVP DSRDKCPGTP RGVQVDANGC PPEPAAVVEE VVVQKEEVIV IRDVHFEFDS ARLTSSDKER LNTIATRLKQ EAPSARLSVS GHTDSVGSDS YNQKLSERRA HSVTDYLVES GVPRRSFVSV VGAGETQPVA DNATAEGRAM NRRTEIKIQR
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