Gene PputGB1_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4288 
Symbol 
ID5872095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4799689 
End bp4800834 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID641549422 
Productbeta-lactamase 
Protein accessionYP_001670512 
Protein GI167035281 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATCC AGGGTCACTA TGAGCTGAAG TTCGAAGCCG TGCGCGAAGC CTTTGCCGCG 
TTGTTCGATG ATCCCCAGGA GCGTGGTGCC GCACTGTGCA TCCAGGTGGG GGGCGAAACC
GTTATTGACC TGTGGGCCGG CAGTGCCGAC AAAGACGGCC AGCAGGCTTG GCACAGCGAT
ACCATCGCCA ACCTGTTCTC CTGCACCAAG ACGTTCACCG CCGTCACCGC CCTGCAACTG
GTCGGCGAGG GTAAGCTGGC CCTCGATGCC CCGGTGACCA ACTACTGGCC CGAGTTCGCC
CAGGCCGGTA AGCAGTCGGT CACTTTGCGC CAACTGCTCA GCCACCGTGC CGGCTTGCCG
GCGATTCGCG AGCTGCTGCC GGCCGAGGCA TTGTACGACT GGCAGACCAT GGTCGATGCC
CTGGCGGCCG AGACACCTTG GTGGACACCC GGCACCGAAC ACGGCTATGC CGCCATCACC
TACGGCTGGC TGATCGGCGA GCTGATTCGC CGCGCCGATG GCCGTGGCCC TGGCGACTCG
ATCGTGGCCC GCACCGCCCG CCCGTTGGGG TTGGATTTCC ACGTTGGCCT GGCAGACGAA
GAGTTCCACC GCGTGGCGCA TATCGCCCGT GGCAAAGGCA ACCCGGGGGA TGCCGCAGCG
CAGCGCTTGC TACAGGTAAC CATGCGTGAG CCAGAGGCGT TGTCGACCCG TGCATTCACC
AACCCGCCGG CGATCCTGAC CAGTACCAAC AAGCCTGAAT GGCGTCGTAT GCAACAGCCA
GCGGCCAATG GCCATGGCAA CGCACGCAGC CTGGCGGGCT TCTATGCCGG GCTTCTTGAC
GGCAGCCTGC TCGAATCTGA ACTGCTCGAT GAACTGACCC GTGAACACAG CCTGGGTCAG
GACCGTACCT TGCTCACCCA AACCCGCTTT GGCCTGGGCT GCATGCTCGA CCAGCCCGAG
GTGGCCAACG CCACCTTTGG CCTCGGCGCC CGCGCCTTCG GCCACCCCGG TGCCGGTGGT
TCGGTCGGTT TTGCCGACCC GGAGCACGAT GTGGCCTTCG GTTTCGTGGT CAATACCCTC
GGCCCTTATG TGCTGATGGA CCCACGCGCG CAAAAGTTGG TACGCGTCCT TGCCAGTTGC
CTTTGA
 
Protein sequence
MQIQGHYELK FEAVREAFAA LFDDPQERGA ALCIQVGGET VIDLWAGSAD KDGQQAWHSD 
TIANLFSCTK TFTAVTALQL VGEGKLALDA PVTNYWPEFA QAGKQSVTLR QLLSHRAGLP
AIRELLPAEA LYDWQTMVDA LAAETPWWTP GTEHGYAAIT YGWLIGELIR RADGRGPGDS
IVARTARPLG LDFHVGLADE EFHRVAHIAR GKGNPGDAAA QRLLQVTMRE PEALSTRAFT
NPPAILTSTN KPEWRRMQQP AANGHGNARS LAGFYAGLLD GSLLESELLD ELTREHSLGQ
DRTLLTQTRF GLGCMLDQPE VANATFGLGA RAFGHPGAGG SVGFADPEHD VAFGFVVNTL
GPYVLMDPRA QKLVRVLASC L