| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4282 |
|---|
| Symbol | |
|---|
| ID | 5872089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4793837 |
|---|
| End bp | 4795444 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641549416 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001670506 |
|---|
| Protein GI | 167035275 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.289035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGAA TCACCGAACT GAAGCTGCCC CTGGACCATC CTGACGAAGC GCTGCGTGAA
GCCATCGTCC AGCGCCTGGG CATCCGCGAC GAGCAATTGC TCAGCTTCAA CCTGTTCAAG
CGCAGCTACG ATGCGCGCAA GAAGAACAGC GAACTGCAGT TCATCTACAC CATCGATCTG
GAAGCCAGCA ACGAAGCCGA ACTGCTCAGC AAGTTCGCCG ACGATCGCAA CATCAGCGTG
GCACCAGACG TGACCTACAA GTACGTCGGC CACGCCCCGG CCGACATGCA GGAGCGCCCG
ATCGTGGTCG GTTTCGGCCC GTGCGGCATC TTTGCCGGCC TGCTGCTGGC ACAGATGGGG
TTCAAGCCGA TCATCCTCGA ACGCGGCAAG GAAGTGCGCC AGCGCACCAA GGACACCTGG
GGCCTGTGGC GCAAGAGCGT GCTCAACCCA GAGTCCAACG TGCAGTTCGG CGAAGGCGGC
GCCGGCACCT TCTCCGACGG CAAGCTGTAC AGCCAGATCA AGGACCCGCA GCACCACGGC
CGCAAGGTAC TGGAAGAGTT CGTCAAGGCC GGTGCCCCGG ACGAAATCCT GTACATCAAC
AAGCCGCACA TCGGCACCTT CCGCCTCACC GGCATGGTCG AGCAGATGCG CCAGGACATG
ATTGCCCTGG GTGCCGAAGT GCGCTTCCAG GAGAAGGTCA CCGACCTGCT GGTCGAAGAT
GGCCAGTTGA CTGGCGTGGT ACTGGAGAGT GGCGAGCAGC TGCACTCGCG CCATGTGGTC
CTGGCCCTTG GCCACAGCGC CCGCGACACC TTCCGTATGC TGCACGCCAA AGGCGTGTAC
ATGGAAGCCA AGCCATTCTC GGTCGGCTTC CGCATCGAGC ACCCGCAAAC GCTGATCGAC
AAGGCGCGCC TGGGCAAGTA CGCCGGCCAC CCCAAACTCG GTGCCGCCGA CTACAAGCTG
GTGTACCACG CCAAGAACGG CCGCTCCGTA TACAGCTTCT GCATGTGCCC AGGCGGCACC
GTGGTCGCGG CTACCAGCGA GCCAGGCCGA GTCGTTACCA ACGGCATGAG CCAGTACTCG
CGTAACGAGC GCAACGCCAA CTCCGGCATC GTCGTCGGTA TCGACCCCGA GCGCGACTAC
CCGGGTGGCC CGCTGGCCGG TATCGAGCTG CAGGAACGCC TGGAGGCCCA TGCCTACGTG
ATGGGTGGCA GCAACTACCA GGCCCCGGCG CAGTTGGTGG GTGACTTTGT CGCCGGCCGG
CCATCGACCG CACTGGGCAG TGTCGAGCCG TCCTATAAGC CGGGCGTGAC CCTGGGTGAT
CTGGCGCCAA GCCTGCCGGA CTTCGCCATC GAGGCGATCC GTGAGGCACT GCCGGCATTC
GACCGCCAAA TCAAAGGCTA CAACCTGCAT GACGCGGTGT TGACCGGGAT CGAAACGCGT
ACCTCGTCGC CCCTGCGCAT TACCCGGGGT GAGGATTACC AGAGCCTGAA CCTCAAGGGG
CTGTTCCCCG CGGGTGAAGG CGCCGGCTAC GCGGGCGGGA TTCTGTCCGC GGGTGTGGAT
GGTATCCGCA TTGCCGAGGC GGTAGCACGG GATATGCTCG GCCTCTGA
|
|---|
| Protein sequence | MLRITELKLP LDHPDEALRE AIVQRLGIRD EQLLSFNLFK RSYDARKKNS ELQFIYTIDL
EASNEAELLS KFADDRNISV APDVTYKYVG HAPADMQERP IVVGFGPCGI FAGLLLAQMG
FKPIILERGK EVRQRTKDTW GLWRKSVLNP ESNVQFGEGG AGTFSDGKLY SQIKDPQHHG
RKVLEEFVKA GAPDEILYIN KPHIGTFRLT GMVEQMRQDM IALGAEVRFQ EKVTDLLVED
GQLTGVVLES GEQLHSRHVV LALGHSARDT FRMLHAKGVY MEAKPFSVGF RIEHPQTLID
KARLGKYAGH PKLGAADYKL VYHAKNGRSV YSFCMCPGGT VVAATSEPGR VVTNGMSQYS
RNERNANSGI VVGIDPERDY PGGPLAGIEL QERLEAHAYV MGGSNYQAPA QLVGDFVAGR
PSTALGSVEP SYKPGVTLGD LAPSLPDFAI EAIREALPAF DRQIKGYNLH DAVLTGIETR
TSSPLRITRG EDYQSLNLKG LFPAGEGAGY AGGILSAGVD GIRIAEAVAR DMLGL
|
|---|
| |