Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4257 |
Symbol | |
ID | 5872061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4760542 |
End bp | 4762185 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549388 |
Product | acetolactate synthase |
Protein accession | YP_001670481 |
Protein GI | 167035250 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGG CCGCCGATGT CGTTGTGCAA TGCCTGGAAA ACGAAGGTGT CGAGTATGTA TTCGGCATTC CTGGTGAGGA AAACCTCGAC CTGCTCGAAT CCCTGCGCAA GTCGAAGATC AAGCTGGTAC TGACCCGTCA CGAGCAGTCT GCAGGTTTCA TGGCTGCCAC CTACGGCCGC CTGACCGGCA AGACCGGCGT CAGCCTGTCG ACCCTCGGCC CTGGCGCCAC CAACCTGGTC ACCGCCAGCG CCTATGCCTA CCTGGGCGGC ATGCCGATGA TGATGATCAC CGGGCAGAAG CCGATCAAGA AGTCCAAGCA GGGCCGCTTC CAGATCATTG ACGTGTGCGG CATGATGGAC CCCATCACCA AGTACACCCA CCAGTTCGCC TCGGCCGACA ACATCCCGTC GCGCATGCGC GAAGCCTTCC GCCTGGCCGA AGAAGAAAAG CCGGGGGCGG TACACCTGGA GCTGCCGGAA GACATCGCCG CCGAGCAGAC TGATGCACTG CCGATCCCGC GCAGCCTGCA CCGCCGCCCG CTGGCCGAGC ACGTGGCCAT CGAAGCAGCC GTCGAGAAAC TGCTGAACGC CCGTAACCCG ATCCTGGTGA TCGGCGCAGG CGCCAACCGC AAGATGACCG CCAAGGTCCT CAAGCAACTG ATCGACAAAA CCGGCATCCC GTTCATCACC ACCCAGATGG GTAAGGGTGT GGTCGACGAG CGCCACCCGC GCTTCCTGGG CAACGCTGCG CTGTCGTCGG GTGACTTCGT TCACCGCGCC GTCGAAGCGG CCGACCTGAT CATCAACATC GGCCACGACG TGATCGAGAA GCCGCCATTC TTCATGGTCC GTGGCGGCAC CGAGGTCATT CACATCAACT TCCGCTCCGC TGAAGTCGAT GCCGTGTACT TCCCGCAGGT TGAAGTGATC GGCGACATTG CCAACGCCGT GTGGCAGATC AGCGAAGCGC TGAACGACAC GTCGCACTGG GACTTCACCC GCCTGATGGC CATTCGTGAA GCCAACGAAG CACAGATCGC CGAAGGTGCC GACGATAACC GCTTCCCGGT CTACCCGCAG CGCCTGGTGG CCGACATCCG TCGTGTACTG CCGTCCGAAG GCATCGTTGC CCTGGACAAC GGCATCTACA AGATCTGGTT CGCCCGTAAC TACAAGGCGC ACAAGCCCAA CACCGTGCTG CTGGACAACG CCCTGGCGAC CATGGGCGCC GGCTTGCCAT CGGCGATGGC CGCGCACCTG GTGCACCCGG ACCGCCCGGT GATTTCGGTG TGCGGTGACG GTGGCTTCAT GATGAACAGC CAGGAGCTGG AAACCGCGGT ACGTCTGGGC ATGCACATCA CCGTGGTGAT CCTGCGTGAC GACGGCTATG GCATGATCCG CTGGAAGCAG GCCAACATGG GCTTCACCGA TTTTGGCCTG GACTACGGCA ACCCGGACTT CGTCAAATAC GCCGAAGCCT ATGGTGCCAA TGGCCACCGC GTGGAAAGCG CCGAAGGCCT GCTGCCGCTG CTGGAACACT GCATCAAGAC CCCAGGCGTG CACGTGATCG ACTGCCCGGT CGACTACAGC GAGAACGACC GCATCCTCAA CAGCGAGTTG CGTGAGCGCG CGCTGGCGGT ATAA
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Protein sequence | MAKAADVVVQ CLENEGVEYV FGIPGEENLD LLESLRKSKI KLVLTRHEQS AGFMAATYGR LTGKTGVSLS TLGPGATNLV TASAYAYLGG MPMMMITGQK PIKKSKQGRF QIIDVCGMMD PITKYTHQFA SADNIPSRMR EAFRLAEEEK PGAVHLELPE DIAAEQTDAL PIPRSLHRRP LAEHVAIEAA VEKLLNARNP ILVIGAGANR KMTAKVLKQL IDKTGIPFIT TQMGKGVVDE RHPRFLGNAA LSSGDFVHRA VEAADLIINI GHDVIEKPPF FMVRGGTEVI HINFRSAEVD AVYFPQVEVI GDIANAVWQI SEALNDTSHW DFTRLMAIRE ANEAQIAEGA DDNRFPVYPQ RLVADIRRVL PSEGIVALDN GIYKIWFARN YKAHKPNTVL LDNALATMGA GLPSAMAAHL VHPDRPVISV CGDGGFMMNS QELETAVRLG MHITVVILRD DGYGMIRWKQ ANMGFTDFGL DYGNPDFVKY AEAYGANGHR VESAEGLLPL LEHCIKTPGV HVIDCPVDYS ENDRILNSEL RERALAV
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