| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4247 |
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| Symbol | |
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| ID | 5872051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4750286 |
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| End bp | 4751575 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549378 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001670471 |
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| Protein GI | 167035240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TCCGTTGGTG GATGGTCAGC CTTGTCACGG CCGGGCTCGT CGTCAACTAC
CTCGCCCGCA ATACCCTCTC GGTGGCTGCC CCCACCTTGA TGACCGACCT TTCCATCAGT
ACCGAGCAAT ACGCCAAGAT CGTCGCCGCC TGGCAGGTGT GCTACGCCCT CATGCAGCCG
GTGGCCGGCT GGTTCATCGA CTTCATCGGC ACCAAGCTGG GCTTTGCCGT GTTCGCCATG
GCCTGGTCTG TGGCCTGTGC CGGCGCGGCC CTGGCTACAG GCTGGCAGAG CATGGCATTC
ATGCGCGGGC TGCTGGGCAT GACCGAGGCC GCGGGCTTGC CGGCCGGGGT CAAGGCTACT
ACCGAGTGGT TCCCGGCCAA GGAGCGTTCG GTGGCGATCG GTTGGTTCAA TATCGGCTCG
TCGCTTGGCG CCTTGCTGGC GCCGCCACTG GTGGTGTGGG CGATCCTGCA CAGTGGCTGG
CAACTGGCGT TCGTCATTGT TGGCGCGTCA GGCATTGTCT GGACGTTGCT GTGGATGCTG
CTGTACAAGC ACCCGCGTGA CCAGAAGCGC CTGAGTGATG AGGAACGGGA CTACATCCTT
GCCGGGCAGG AAGCGCACTT CAAACAGGAC ACCCGCGAGA AGGGCGCGTG GAAGCGCATC
TTCAAGACCC GCAACTTCTA CGCCATCGCA TCGGCGCGAA TTCTTTCCGA GCCCGCCTGG
CAAACCTTCA ATGCCTGGAT CCCGCTGTAC CTGATGACCG AGCGGCACAT GAACATCAAG
GAAGTGGCGA TGTTCGCCTG GCTGCCGTTC CTGGCGGCCG ATATCGGCTG TGTGCTGGGC
GGTTACCTAA GCCCGTTGTT CCACCGCTAC TTCAAGGTGT CGCTGTTCAC CTCGCGCAAG
ATGGTGCTGG TGTTCGGTGC CAGTTGCATG ATCGGCCCGG CCTGCATCGG CCTGGTGGAA
AGCCCGTACA CCGCGATCCT GTTGCTGTGC ATTGGCGGCT TTGCCCACCA GACGCTGTCG
GGGGCGCTGT ACTCGATCAC TTCGGATTCG TTCAGCAAGG ACCAGGTGGC CACGGCGACC
GGCATGGGTG GCATGTGCGG CTATCTGGGG GCGGCGGTGT TCACCTTGGT GTTCGGCGTG
CTGGTCACGC AGATTGGCTA CAGCCCGTTG TTCGTGGTGC TGGCAGCGTT CGATATCGTG
GCGGCGGTGC TGGTGTGGAA GGTGGCGCGC GAAGTGAGTG GCGAGTCTTC TGTCAGGAAG
ATGGCAAGCT CGACCGAGGC ACTGGCATAA
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| Protein sequence | MKGIRWWMVS LVTAGLVVNY LARNTLSVAA PTLMTDLSIS TEQYAKIVAA WQVCYALMQP
VAGWFIDFIG TKLGFAVFAM AWSVACAGAA LATGWQSMAF MRGLLGMTEA AGLPAGVKAT
TEWFPAKERS VAIGWFNIGS SLGALLAPPL VVWAILHSGW QLAFVIVGAS GIVWTLLWML
LYKHPRDQKR LSDEERDYIL AGQEAHFKQD TREKGAWKRI FKTRNFYAIA SARILSEPAW
QTFNAWIPLY LMTERHMNIK EVAMFAWLPF LAADIGCVLG GYLSPLFHRY FKVSLFTSRK
MVLVFGASCM IGPACIGLVE SPYTAILLLC IGGFAHQTLS GALYSITSDS FSKDQVATAT
GMGGMCGYLG AAVFTLVFGV LVTQIGYSPL FVVLAAFDIV AAVLVWKVAR EVSGESSVRK
MASSTEALA
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