| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4243 |
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| Symbol | |
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| ID | 5872047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4746552 |
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| End bp | 4747079 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549374 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001670467 |
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| Protein GI | 167035236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.376874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TTTTTCTGCG TGCGAACGAC ACGCTGTACC GCGGCTGCAT CTGGATCGCC
GGCCTGTCGA TCCTGGCCAT GTCGCTGATC ATCCCTTGGG GCATTTTCGC CCGCTACGTG
CTCGGCACTG GCTCAAGCTG GCCGGAGCCA GTGGCCATCT TGCTGATGGT GGTGTTCACC
TTCGTCGGCG CCGCAGCCAG CTACCGGGCT GGGGCGCACA TGGCGGTGGC GATGATTACA
GACCGCCTGC CACCACTGCA GCGCCAGTTG GTTGCGCTGC TGGTGCAAGT GCTGATGATT
CTGGTGTGCG TGTTCATGAC TTACTACGGC ACCAAGCTGT GCATCACTAC CTGGAACCAG
TCTCTGGCGT CATTGCCTGG GGTGCGGGTT GGCATGACCT ATGCGCCGAT TCCGCTCGGT
GGTGTGCTGA CCCTGGTGTT CGTACTGGAA AAACTCCTCT TGGGCGATCA GAGCCACCGC
AAGGTGGTGC GCTTCGACCA CGTAGAAGAA AGCGAAGGAG CGGCGTAA
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| Protein sequence | MKNLFLRAND TLYRGCIWIA GLSILAMSLI IPWGIFARYV LGTGSSWPEP VAILLMVVFT
FVGAAASYRA GAHMAVAMIT DRLPPLQRQL VALLVQVLMI LVCVFMTYYG TKLCITTWNQ
SLASLPGVRV GMTYAPIPLG GVLTLVFVLE KLLLGDQSHR KVVRFDHVEE SEGAA
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