| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4236 |
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| Symbol | |
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| ID | 5872040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4736798 |
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| End bp | 4739677 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549367 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001670460 |
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| Protein GI | 167035229 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.938732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG ACACAACTCG CGAGAACCCG CAGGCAAAGG TGCCGCAGGC CGCCGATTCC
AACCAGGATC TGGCCGCCAC CGCCCCCGGC CAACTGCGCG TGATCAAGCG TAACGGCACT
GTCGTCCCTT ACACCGACGA CAAGATCACC GTGGCCATCA CCAAGGCGTT CCTCGCAGTT
GAAGGCGGCA CCGCCGCCGC TTCGTCGCGC ATCCACGACA CCGTCGCGCG TCTGACCGAG
CAGGTTACCG CCACGTTCAA GCGTCGCATG CCATCGGGTG GCACCATCCA CATCGAAGAA
ATCCAGGACC AGGTCGAACT GGCCCTGATG CGCGCCGGCG AGCAGAAAGT TGCCCGCGAC
TACGTGATCT ACCGCGACCA GCGTGCCAAG GAGCGTGCCA CCCGCGCCAA CACCGACGCC
GTGGTCGAGC CGCACCCAAG CATCCGCATC ACCCTGGCCG ACGGCAGCCT GGCTCCGCTC
GATATGGCCC GCCTGAACAC CATCATCAGC GAAGCCTGCG AAGGCCTGGC CGAAGTCGAT
GGCGACCTGA TCCAGCGCGA AACCCTGAAG AACCTGTACG ACGGCGTGGC CATCAAGGAC
GTCAACACCG CCCTGGTGAT GACCGCCCGT ACCCTGGTAG AGCGCGAGCC CAACTACTCG
TTCGTTACCG CACGCCTGCT GATGGACACC CTGCGCGCCG AAGGCCTGGG CTTCCTCAAC
GTAGCCGACA GCGCTACCCA CCACGAAATG GCCGACCTGT ACGCCAAGGC CCTGCCAGCC
TACGTCGCCA AAGGTATCGA GTTCGAACTG CTGAACCCGG CGCTGGCCGA CTTCGACCTG
GAAAAACTGG GCAAGGCGAT CAACCACGAA CGCGACCAGC AGTTCACCTA CCTGGGCCTG
CAGACCCTGT ACGACCGCTA CTTCATCCAC AAGGATGGCG TGCGCTTCGA GCTGCCGCAG
GTGTTCTTCA TGCGTGTGGC CATGGGCCTG GCGCTGGAGG AGAAAGACAA GGAAGCCCGT
GCGATCGAGT TCTACAACCT GTTGTCGTCG TTCGACTACA TGGCCTCGAC CCCGACCCTG
TTCAACGCCG GCACCCTGCG CCCGCAGCTG TCCAGCTGCT ACCTGACCAC CGTGCCGGAC
GATCTGTCGG GCATCTACCA CGCGATTCAC GACAACGCCA TGCTGTCGAA ATTCGCCGGT
GGCCTGGGCA ACGACTGGAC CCCTGTGCGC GCACTGGGCT CCTACATCAA GGGTACCAAC
GGTAAATCCC AGGGCGTCGT ACCGTTCCTG AAAGTGGTCA ACGACACCGC CGTTGCCGTC
AACCAGGGTG GCAAGCGCAA GGGCGCCGTG TGTGCCTACC TGGAAACCTG GCACCTGGAC
ATCGAAGAGT TCATCGAGCT GCGCAAGAAC ACCGGTGATG ACCGTCGTCG TACCCACGAC
ATGAACACCG CCAACTGGAT CCCCGACCTG TTCATGAAGC GTGTCTTCGA TGACGGCAAG
TGGACCCTGT TCTCGCCTTC GGAAGTGCCA GACCTGCACG ACCTGACCGG CAAGGCCTTC
GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ACCGAGTACA ACAAGATCAA GGTGTTCAAG
ACCATCCAGG CCAAAGACCT GTGGCGCAAG ATGCTGTCGA TGCTGTTCGA GACCGGCCAC
CCATGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGTTCGC CGCAGCAGCA TGTGGGCGTG
GTCCACAGCT CCAACCTGTG CACCGAGATC ACCTTGAACA CCAACAAGGA TGAGATCGCG
GTCTGCAACC TGGGCTCGAT CAACCTGCCG AACCACATCG TCGATGGCAA GCTGGACACC
GCCAAGCTGC AACGCACCGT CAACACCGCT GTGCGCATGC TCGACAACGT GATCGACATC
AACTACTACT CGGTGCCGCA GGCGCGTAAC TCGAACCTCA AGCACCGCCC GGTCGGCCTG
GGCATCATGG GCTTCCAGGA CGCACTGTAC CTGCAGCACA TCGCCTACGG CTCCGACGCT
GCCGTCGAGT TCGCCGACAA GTCGATGGAA GCGGTCAGCT ACTACGCGAT CCAGGCGTCC
TGCGACCTGG CCGACGAGCG TGGCGCCTAC GAGACCTTCC AGGGTTCGCT GTGGTCCAAG
GGCATCCTGC CGCTGGATTC GCAACAGATC CTGATCGAAG CCCGTGGCCA GAAGTACATC
GACGTCGACC TGAACGAAAC CCTGGACTGG GCGCCGGTAC GTGCCCGCGT ACAGAAAGGT
ATTCGTAACT CGAACATCAT GGCCATCGCG CCAACCGCGA CCATCGCCAA CATCACCGGC
GTGTCGCAGT CGATCGAGCC GACCTACCAG AACCTGTACG TGAAATCGAA CCTGTCGGGC
GAGTTCACCG TGATCAACCC GTACCTGGTC CGCGACCTGA AGGCCCGCGG CCTGTGGGAC
TCGGTCATGA TCAACGACCT GAAGTACTAC GACGGCTCGG TGCAGCAGAT CGAACGTATC
CCGCAAGAGC TGAAAGACCT GTACGCCACC GCGTTCGAAG TCGAGACCAA GTGGATTGTC
GACGCAGCTT CCCGTCGCCA GAAGTGGATC GACCAGGCTC AGTCGCTGAA CCTGTACATC
GCCGGCGCCT CGGGCAAGAA GCTGGACGTG ACCTACCGCA TGGCCTGGTA CCGTGGTCTG
AAAACCACCT ACTACCTCCG TGCCCTGGCC GCGACCAGCA CCGAGAAGTC GACCATCAAC
ACCGGCAAGC TCAACGCCGT TTCCAGCGGT GGCGACAGCG CCCCGGTTCA GGCAGCCGGC
CCTGCGCCAG TGCCAAAGGC CTGCGCGATC GACGAGCCTG ACTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTDTTRENP QAKVPQAADS NQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYRDQRAK ERATRANTDA VVEPHPSIRI TLADGSLAPL DMARLNTIIS EACEGLAEVD
GDLIQRETLK NLYDGVAIKD VNTALVMTAR TLVEREPNYS FVTARLLMDT LRAEGLGFLN
VADSATHHEM ADLYAKALPA YVAKGIEFEL LNPALADFDL EKLGKAINHE RDQQFTYLGL
QTLYDRYFIH KDGVRFELPQ VFFMRVAMGL ALEEKDKEAR AIEFYNLLSS FDYMASTPTL
FNAGTLRPQL SSCYLTTVPD DLSGIYHAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN
GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHLD IEEFIELRKN TGDDRRRTHD
MNTANWIPDL FMKRVFDDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL TEYNKIKVFK
TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSINLP NHIVDGKLDT AKLQRTVNTA VRMLDNVIDI NYYSVPQARN SNLKHRPVGL
GIMGFQDALY LQHIAYGSDA AVEFADKSME AVSYYAIQAS CDLADERGAY ETFQGSLWSK
GILPLDSQQI LIEARGQKYI DVDLNETLDW APVRARVQKG IRNSNIMAIA PTATIANITG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKARGLWD SVMINDLKYY DGSVQQIERI
PQELKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTIN TGKLNAVSSG GDSAPVQAAG PAPVPKACAI DEPDCEACQ
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