Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4228 |
Symbol | |
ID | 5872032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4727616 |
End bp | 4728938 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549359 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_001670452 |
Protein GI | 167035221 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAC GTCAGCCGCT GTACAAATCC CTGTATGTCC AGGTGATCAT TGCCATCACC ATCGGCATCC TGCTCGGCCA CTACTACCCG GAAACGGGCG TCGCCCTCAA ACCCCTGGGT GACGGCTTCG TCAAGTTGAT CAAGATGGTC ATCGCCCCGA TCATCTTCTG TACCGTGGTC AGCGGCATCG CCGGCATGCA GAGTATGAAG TCGGTCGGCA AGACTGGCGG CTACGCGCTG CTGTATTTCG AAATCGTCTC CACCATCGCC CTGATCATCG GCCTCGTCGT CGTCAACGTG GTCAAGCCCG GCGCTGGCAT GCACATCGAC GTCAGCACCC TGAATGCCAG CAGCGTGGCT GCCTATGCCG CCGCCGGCGC GCAGCAGACC ACCGTCGGCT TCCTGCTCAA CGTCATCCCC AACACCGTGG TCGGCGCCTT CGCCAACGGC GACATCCTGC AAGTGCTGAT GTTCTCGGTG CTGTTCGGCT TCGCCCTGCA CCGCCTGGGC AGCTACGGCA AGCCGTTGCT GGACATGATC GACCGCTTCG CCCATGTCAT GTTCAACATC ATCAACATGA TCATGAAGCT GGCCCCGATC GGCGCCTTCG GTGCCATGGC CTTCACCATC GGCCAGTACG GCGTTGGCTC GCTGGTGCAG CTGGGCTACC TGATGGCCTG CTTCTACATC ACCTGCCTGC TGTTCGTGCT GGTGGTGCTG GGCGGTATCT GCCGTGCCCA CGGTTTCAGC GTGCTCAAGC TGATCCGCTA CATCCGTGAA GAACTGCTGA TCGTACTGGG TACTTCGTCC TCGGAGTCGG CCCTGCCACG CATGCTGGCC AAGATGGAGC GCCTGGGCGC GAAGAAGTCG GTGGTGGGCC TGGTCATCCC GACCGGTTAC TCGTTCAACC TGGACGGTAC CTCGATCTAC CTGACCATGG CTGCGGTGTT CATCGCTCAG GCGACCGACA CCACCATGGA CATCACTCAC CAGATCACCC TGCTGCTGGT GCTGTTGGTA GCTTCCAAAG GTGCTGCCGG CGTTACCGGT TCGGGCTTCA TCGTCCTGGC CGCAACCCTG TCGGCCGTTG GCCACCTGCC GGTTGCCGGC CTGGCGCTGA TCCTCGGCAT CGACCGCTTC ATGTCCGAAG CCCGCGCCCT GACCAACCTA GTGGGCAACG CCGTTGCTAC CGTGGTAGTG GCCAAGTGGG TCAAGGAAAT GGACAACGAC AAGCTGGCTT CGGAACTGGC TTCCGGTGGT GCGCCGCTGG TCGATGCGCG TCCGACCGAC GACCTGGGTG TGGCCGAAGG CCCGGCTCGC TGA
|
Protein sequence | MTTRQPLYKS LYVQVIIAIT IGILLGHYYP ETGVALKPLG DGFVKLIKMV IAPIIFCTVV SGIAGMQSMK SVGKTGGYAL LYFEIVSTIA LIIGLVVVNV VKPGAGMHID VSTLNASSVA AYAAAGAQQT TVGFLLNVIP NTVVGAFANG DILQVLMFSV LFGFALHRLG SYGKPLLDMI DRFAHVMFNI INMIMKLAPI GAFGAMAFTI GQYGVGSLVQ LGYLMACFYI TCLLFVLVVL GGICRAHGFS VLKLIRYIRE ELLIVLGTSS SESALPRMLA KMERLGAKKS VVGLVIPTGY SFNLDGTSIY LTMAAVFIAQ ATDTTMDITH QITLLLVLLV ASKGAAGVTG SGFIVLAATL SAVGHLPVAG LALILGIDRF MSEARALTNL VGNAVATVVV AKWVKEMDND KLASELASGG APLVDARPTD DLGVAEGPAR
|
| |