| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4206 |
|---|
| Symbol | |
|---|
| ID | 5872007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4703560 |
|---|
| End bp | 4703781 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641549334 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_001670430 |
|---|
| Protein GI | 167035199 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.384212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTT ATGACTATCA ATGTGCGTCC TGCGAGCACC GCATGGAAGT GCTGCAGAAG
ATCAGTGCCG CGCCGCTGGT CGATTGCCCG GCCTGCCAGG CGCCGGCACT GAAAAAGCTG
CTGTCGGTGC CAGGCTTCCG CCTGAGCGGT AATGGTTGGT ACGAAACCGA CTTCAAGACC
GGGGCGAAAA AGAATCTGGC AGGCGGCGAC AAGGCCGACT GA
|
|---|
| Protein sequence | MPLYDYQCAS CEHRMEVLQK ISAAPLVDCP ACQAPALKKL LSVPGFRLSG NGWYETDFKT
GAKKNLAGGD KAD
|
|---|
| |