Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4200 |
Symbol | |
ID | 5872001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4697831 |
End bp | 4698283 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549328 |
Product | tol-pal system-associated acyl-CoA thioesterase |
Protein accession | YP_001670424 |
Protein GI | 167035193 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family [TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.367475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGC AAAATCAGCT CGAACCGTTC GCACACCGTT GTCGCGTCTA TTACGAAGAT ACCGATGCGG GCGGCGTGGT GTATTACGTC AACTACCTGA AATTCATGGA GCGCGCGCGC ACCGAACGCC TGCGGCACCT GGGCTTTTCC CAGTCGCAAC TGGCCGAAGA CAACCTGCTG TTCGTGGTTC ATTCCAGCGA AGCGCGGTAT CACGCGCCGG CGCGGCTTGA TGACGAACTG CGGGTGACCG CGCAAGTACT TGAACTCAAT CGCGCCAGCT TGCGCTTCGT GCAGCAGGTC TGGCGGGAAA AGGATGACAC GCTGCTTTGC GAAGGGCAGT TCCTGGTGGC CGCCGTGCGC GCCGACACTT TCAAACCCCG AGCCATACCC CCCCAGCTGC GCGAAGCCTT TATGGCGGAC GGCTCGGGTA ATCAATCGAA TGCAGGAGAA TAA
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Protein sequence | MRAQNQLEPF AHRCRVYYED TDAGGVVYYV NYLKFMERAR TERLRHLGFS QSQLAEDNLL FVVHSSEARY HAPARLDDEL RVTAQVLELN RASLRFVQQV WREKDDTLLC EGQFLVAAVR ADTFKPRAIP PQLREAFMAD GSGNQSNAGE
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