Gene PputGB1_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4200 
Symbol 
ID5872001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4697831 
End bp4698283 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID641549328 
Producttol-pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001670424 
Protein GI167035193 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.367475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AAAATCAGCT CGAACCGTTC GCACACCGTT GTCGCGTCTA TTACGAAGAT 
ACCGATGCGG GCGGCGTGGT GTATTACGTC AACTACCTGA AATTCATGGA GCGCGCGCGC
ACCGAACGCC TGCGGCACCT GGGCTTTTCC CAGTCGCAAC TGGCCGAAGA CAACCTGCTG
TTCGTGGTTC ATTCCAGCGA AGCGCGGTAT CACGCGCCGG CGCGGCTTGA TGACGAACTG
CGGGTGACCG CGCAAGTACT TGAACTCAAT CGCGCCAGCT TGCGCTTCGT GCAGCAGGTC
TGGCGGGAAA AGGATGACAC GCTGCTTTGC GAAGGGCAGT TCCTGGTGGC CGCCGTGCGC
GCCGACACTT TCAAACCCCG AGCCATACCC CCCCAGCTGC GCGAAGCCTT TATGGCGGAC
GGCTCGGGTA ATCAATCGAA TGCAGGAGAA TAA
 
Protein sequence
MRAQNQLEPF AHRCRVYYED TDAGGVVYYV NYLKFMERAR TERLRHLGFS QSQLAEDNLL 
FVVHSSEARY HAPARLDDEL RVTAQVLELN RASLRFVQQV WREKDDTLLC EGQFLVAAVR
ADTFKPRAIP PQLREAFMAD GSGNQSNAGE