Gene PputGB1_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4193 
Symbol 
ID5871994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4692067 
End bp4692714 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID641549321 
Productradical SAM domain-containing protein 
Protein accessionYP_001670417 
Protein GI167035186 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA CATTACGCAT CACCGAAGTC TTTTACTCTT TGCAGGGTGA AACGCGAACG 
GCTGGGTTGC CCACCGTATT CGTGCGCCTC ACAGGTTGCC CCCTGCGCTG CCAGTACTGC
GACAGTGCCT ATGCCTTCAG TGGCGGTACC CTTCGCACCC TCGATTCGAT CCTTGAGCAG
GTGGCCGGTT TCAAACCGCG CTACGTCTGT GTCACCGGTG GTGAGCCATT GGCCCAGCCC
AACGCCCTGC CGTTACTGCA GCGGCTGTGT GATGCCGGGT ACGAAGTGTC GCTGGAAACC
AGCGGTGCGT TGGACATTAC CGGTACCGAC ACCCGCGTCA GCCGTGTGGT CGACCTGAAA
ACCCCAGGTT CCGAAGAATC GCACCGTAAC CGCTACGAGA ACATCGAGCA GCTGACCCGT
AACGACCAGG TCAAGTTCGT CATCTGTTCC CGCGAGGACT ACGACTGGGC GGTTTCCAAG
CTGATCCAGT ACAACCTTTC CGAGCGTGCG GGTGAGGTGT TGTTCTCGCC GAGCCACCAC
CAGGTGAAAG CCAGCGACCT GGCGGACTGG ATCGTTGCCG ACAACCTGCC CGTACGCTTC
CAGCTGCAGC TGCACAAGCT GCTGTGGAAC GACGAACCCG GACGTTGA
 
Protein sequence
MQDTLRITEV FYSLQGETRT AGLPTVFVRL TGCPLRCQYC DSAYAFSGGT LRTLDSILEQ 
VAGFKPRYVC VTGGEPLAQP NALPLLQRLC DAGYEVSLET SGALDITGTD TRVSRVVDLK
TPGSEESHRN RYENIEQLTR NDQVKFVICS REDYDWAVSK LIQYNLSERA GEVLFSPSHH
QVKASDLADW IVADNLPVRF QLQLHKLLWN DEPGR