Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4193 |
Symbol | |
ID | 5871994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4692067 |
End bp | 4692714 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549321 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001670417 |
Protein GI | 167035186 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA CATTACGCAT CACCGAAGTC TTTTACTCTT TGCAGGGTGA AACGCGAACG GCTGGGTTGC CCACCGTATT CGTGCGCCTC ACAGGTTGCC CCCTGCGCTG CCAGTACTGC GACAGTGCCT ATGCCTTCAG TGGCGGTACC CTTCGCACCC TCGATTCGAT CCTTGAGCAG GTGGCCGGTT TCAAACCGCG CTACGTCTGT GTCACCGGTG GTGAGCCATT GGCCCAGCCC AACGCCCTGC CGTTACTGCA GCGGCTGTGT GATGCCGGGT ACGAAGTGTC GCTGGAAACC AGCGGTGCGT TGGACATTAC CGGTACCGAC ACCCGCGTCA GCCGTGTGGT CGACCTGAAA ACCCCAGGTT CCGAAGAATC GCACCGTAAC CGCTACGAGA ACATCGAGCA GCTGACCCGT AACGACCAGG TCAAGTTCGT CATCTGTTCC CGCGAGGACT ACGACTGGGC GGTTTCCAAG CTGATCCAGT ACAACCTTTC CGAGCGTGCG GGTGAGGTGT TGTTCTCGCC GAGCCACCAC CAGGTGAAAG CCAGCGACCT GGCGGACTGG ATCGTTGCCG ACAACCTGCC CGTACGCTTC CAGCTGCAGC TGCACAAGCT GCTGTGGAAC GACGAACCCG GACGTTGA
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Protein sequence | MQDTLRITEV FYSLQGETRT AGLPTVFVRL TGCPLRCQYC DSAYAFSGGT LRTLDSILEQ VAGFKPRYVC VTGGEPLAQP NALPLLQRLC DAGYEVSLET SGALDITGTD TRVSRVVDLK TPGSEESHRN RYENIEQLTR NDQVKFVICS REDYDWAVSK LIQYNLSERA GEVLFSPSHH QVKASDLADW IVADNLPVRF QLQLHKLLWN DEPGR
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