Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4192 |
Symbol | |
ID | 5871993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4691363 |
End bp | 4692049 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549320 |
Product | exsB protein |
Protein accession | YP_001670416 |
Protein GI | 167035185 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA AACGCGCAGT AATCCTGTTG TCCGGGGGCC TGGACTCGGC CACCGTAGTT GCCATGGCCA AGGCCGAAGG CTACAGCTGC TACACCATGA GCTTCGATTA CGGCCAGCGC CATCGTGCCG AGTTGAATGC CGCTGCCCGC GTGGCCCGTG ACCTGGGAGT GGTGGAGCAC AAGGTGATCG GGCTGAACCT TGACGGCATT GGCGGTTCGG CGTTGACCGA CAGCAACATC GATGTGCCGG AAGCCCCAAG TGAGGGTATC CCGGTCACTT ATGTGCCAGC GCGCAACACC GTGTTCCTTT CGCTTGCCCT GGGCTGGGCC GAAGTGTTGG AGGCGCGTGA TATTTTCATT GGCGTCAATG CCGTGGATTA CTCCGGCTAC CCGGATTGCC GCCCCGAGTT CGTCGAAGCC TTCGAGCGCA TGGCAAACCT GGCGACCAAA GCCGGTGTAG AGGGGCAGGG TTTCCGCATC CAGGCGCCGC TGCAGAACAT GAGCAAGGCG CAGATCGTGC AGGCCGGTAT GGCCCGCGGT GTGGATTACA GCCTGACCGT TTCCTGCTAC CAGGCCGATG ATGACGGCCG TGCCTGTGGC AAATGCGACA GCTGCCGCCT GCGCGCCGAC GGCTTCAAGG CCGCCGGTGT CGAAGACCCA ACGCGGTATT TTTCAAAGGT TTTTTGA
|
Protein sequence | MTDKRAVILL SGGLDSATVV AMAKAEGYSC YTMSFDYGQR HRAELNAAAR VARDLGVVEH KVIGLNLDGI GGSALTDSNI DVPEAPSEGI PVTYVPARNT VFLSLALGWA EVLEARDIFI GVNAVDYSGY PDCRPEFVEA FERMANLATK AGVEGQGFRI QAPLQNMSKA QIVQAGMARG VDYSLTVSCY QADDDGRACG KCDSCRLRAD GFKAAGVEDP TRYFSKVF
|
| |