| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4191 |
|---|
| Symbol | |
|---|
| ID | 5871991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4690204 |
|---|
| End bp | 4691163 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641549318 |
|---|
| Product | cation efflux protein |
|---|
| Protein accession | YP_001670415 |
|---|
| Protein GI | 167035184 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3965] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG CAACCAGATC CACCTTTTTT GACATCACCA GCGAACAGGG CCTGTTACGC
ACCTCGATTG CCGTCACCCT GTTCATCGCC ACCATCGGCA TCGCTTTCGG CCTGGCCTCC
GGCTCGTTCT CCATCGTGTT CGACGGCGTG TACTCGCTGG TCGACGCCAG CATGAGTGGC
CTGTCGCTGG TGGTGGTCAA GCTGATCACT TCGCACACCA CCAGCGTGCA AATGTCGCGC
AAGCTGCGCG AGCGCTTCAC CATGGGCTTC TGGCACCTGG AACCGATGGT GCTGGCACTC
AACGGCATCC TGCTCAGCGG CGTAGCCATC TACGCACTGA TCAACGCCGT CAGCAGCCTG
CTGCAAGGCG GCCGTCATCT GGAGTTCGGC ATTGCCATGG TCTACGCGGT GTTGACGGTG
ATCACCTGCG TGACCATCGC CGTCGTCGAG GCGCGCGCCA ACCGCAAGCT GCAATCGGAC
TTCGTGCGCA TGGACGTCAA GGGCTGGGTG ATGTCGGCCA GCATCACCGC CGCCCTGCTG
ATCGCCTTCT GCTTTGGCTA CGCGGTGCAG GGCACCTCGC TGGAATGGGT GTCGCCGTAC
ATCGACCCGG CGGTGCTGGC GCTGGTGTGC CTGGTGATCG TACCGCTGCC CTTGTCGGTG
GTGCGCCAGG CGCTATCGGA AATTTTTCTG GTCACCCCCG GCGACCTCAA GCTGCATGTA
GATGAAGTGG CCAAGGCCTT CGTCGCCCGC CACGGGCTGC AGTCTTACCG CGCCTATGTC
GCCAAGGTCG GGCGCTCGCG GGAAATCGAG CTGTATTTCA TCGTGCCAAA AGGCATGGCT
GCGAAGACCA TCGAAGAATG GGATGCGTGG CGCAACGAGA TTGGCGATGC GGTAGGTGGC
GAAGGGCCTG ACCGTTGGAT TACGGTGGTG TTTACCGGGG ACCCGGAATG GGCTGAGTAA
|
|---|
| Protein sequence | MQTATRSTFF DITSEQGLLR TSIAVTLFIA TIGIAFGLAS GSFSIVFDGV YSLVDASMSG
LSLVVVKLIT SHTTSVQMSR KLRERFTMGF WHLEPMVLAL NGILLSGVAI YALINAVSSL
LQGGRHLEFG IAMVYAVLTV ITCVTIAVVE ARANRKLQSD FVRMDVKGWV MSASITAALL
IAFCFGYAVQ GTSLEWVSPY IDPAVLALVC LVIVPLPLSV VRQALSEIFL VTPGDLKLHV
DEVAKAFVAR HGLQSYRAYV AKVGRSREIE LYFIVPKGMA AKTIEEWDAW RNEIGDAVGG
EGPDRWITVV FTGDPEWAE
|
|---|
| |