Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4184 |
Symbol | |
ID | 5871984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4680469 |
End bp | 4681539 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549311 |
Product | hypothetical protein |
Protein accession | YP_001670408 |
Protein GI | 167035177 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAG TGCTTCGCGA CTGGATGCAG CGCTACTTCT CCGATGAAGA AGCGGTGGTG CTGGCGGTCC TGTTGTTCCT GGCTTTTACT GCGGTACTGA CCCTGGGCGG TATGCTCGCG CCGGTGCTGG CCGGCATGGT GCTGGCGTTC CTGATGCAAG GGCTTGTCAA CGCCCTGGAG CGTGTGCGAG TCCCTACGCG GCTGGCGGTG ATGCTGGTGT TCGCCCTGTT CATGGGCGCG CTGGCGGTAT TCATGCTGGT GCTGGTGCCG CTGCTGTGGC ACCAGTTGAT CACCCTGTTC AACGAGTTGC CGGGCATGCT CGGCAAGTGG CAGTCGCTGT TGCTGCTGTT GCCCGAGCGC TACCCGCATC TGGTGTCGGA CGAGCAGGTG CTGCATGCCA TCGAATCGGT ACGCGGTGAA ATCGGCAAGT TTGGCCAATG GGCGCTGACC TTTTCGCTGT CCAGCCTGCC GCTGCTGGTC AATGCCATGA TCTACCTGGT GCTGGTGCCG ATCCTGGTGT TCTTCTTCCT CAAGGATCGC GAGCTGATCG GCCGCTGGGT CAGCGGCTAC CTGCCCAGCC AGCGCGCGCT GCTTAACCGG GTGGGCAGCG AGATGAACCG GCAGATTGCC AACTACATTC GCGGCAAGGG TATCGAGATC CTGATCTGCG GCATCGCCAC CTATATCGCC TTCATCAGCC TGGGGCTCAA CTACGCCGCG CTGCTGGCGT TGCTGGTGGG GCTGTCGGTG GTGGTGCCTT ACGTGGGGGC GGTGGTGGTG ACCGTACCGG TAACGCTGAT CGCGCTGTTC CAGTGGGGTT GGGGCGACCA GTTCATCTAC CTGATGACGG TGTACGCGAT CATCCAGGCG CTGGATGGCA ACGTGCTGGT GCCGCTGCTG TTCTCCGAGG CGGTGAGCCT GCACCCGGTG GCGATCATTT GCGCGGTATT GCTGTTTGGC GGGTTGTGGG GGTTCTGGGG GATCTTCTTC GCGATTCCGC TGGCGACGTT GATCAAGGCT GTGCTGGATG CCTGGCCGCG ACATGAGCCG AGTGTGTCAC CGATGCTTTG A
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Protein sequence | MFKVLRDWMQ RYFSDEEAVV LAVLLFLAFT AVLTLGGMLA PVLAGMVLAF LMQGLVNALE RVRVPTRLAV MLVFALFMGA LAVFMLVLVP LLWHQLITLF NELPGMLGKW QSLLLLLPER YPHLVSDEQV LHAIESVRGE IGKFGQWALT FSLSSLPLLV NAMIYLVLVP ILVFFFLKDR ELIGRWVSGY LPSQRALLNR VGSEMNRQIA NYIRGKGIEI LICGIATYIA FISLGLNYAA LLALLVGLSV VVPYVGAVVV TVPVTLIALF QWGWGDQFIY LMTVYAIIQA LDGNVLVPLL FSEAVSLHPV AIICAVLLFG GLWGFWGIFF AIPLATLIKA VLDAWPRHEP SVSPML
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