| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4148 |
|---|
| Symbol | |
|---|
| ID | 5871948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4633131 |
|---|
| End bp | 4633298 |
|---|
| Gene Length | 168 bp |
|---|
| Protein Length | 55 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641549276 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_001670374 |
|---|
| Protein GI | 167035143 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.260842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.601946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG CACTACTTGA CCGAAAAGAA GTCTGCAAAA GAATTGGCTT TTCACATACT
TTTGTCTACA AAGAGATGCG AGAAGGTCGA TTCCCCAAGC ATCGAAAAAT CGGCAATCGC
AGTCGCTGGT TGGAATCCGA AGTAGATGAT TGGATTAGAA GCCAATAA
|
|---|
| Protein sequence | MSEALLDRKE VCKRIGFSHT FVYKEMREGR FPKHRKIGNR SRWLESEVDD WIRSQ
|
|---|
| |