Gene PputGB1_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4139 
Symbol 
ID5871939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand- 
Start bp4622425 
End bp4623048 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID641549267 
Productputative transcriptional regulator 
Protein accessionYP_001670365 
Protein GI167035134 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.936463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGG GACTGGGCCG TACCCAACAG GACCTGCTCC ACGCGTTGCT GCACCAGCCA 
GCCGGCATGA GTATCGACGA CCTGGCGCAA GCCCTGGCCA TTACCCGCAC GGCGGTACGC 
CAGCACCTGG CCGCGCTGGA GCGTGATGGC CTGGTCAAGC GCGGCGCCAC CCGGCCTACC 
GGGCGGCGCC CGGAGCAGTT GCATGAGCTG ACTGATCTTG CCCGCGAGCA GTTTCCCCGG 
CAGTACCCGC TACTGGCGAA TCTGCTGATT GGTGAGGTGG CAGGGTTGCT AGGCCAGGAG 
GCACTGCTGG CGCTGATGCG CCAACTGGGG CGCAAGCTGG CGGCGGACCT TGAACACAAG 
GTGGTGGATG AAGCACGCAT CGTCGAGCAC ATGAACAATG CCGGCTATGA AGCGCAGGTG 
TTCTTCCGCT CGGGGGGGGC GCCGCAGATC GTGGCGCACA ATTGTGTGTT CCATCATTTG 
GCCAAGGCGC ATCCGGTGGT GTGCGAGCTT GATCTGGCGC TGATCGGGGC GCTGGGTGGG 
GCCGATGTCA GCCATGAGGA GTGCATGCTC AGGGGAGGGC AGGTGTGCCG GTTTGCGCTG 
GCCCATCCAG AACCGGCAGG CTGA
 
Protein sequence
MLEGLGRTQQ DLLHALLHQP AGMSIDDLAQ ALAITRTAVR QHLAALERDG LVKRGATRPT 
GRRPEQLHEL TDLAREQFPR QYPLLANLLI GEVAGLLGQE ALLALMRQLG RKLAADLEHK 
VVDEARIVEH MNNAGYEAQV FFRSGGAPQI VAHNCVFHHL AKAHPVVCEL DLALIGALGG 
ADVSHEECML RGGQVCRFAL AHPEPAG