| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4134 |
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| Symbol | |
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| ID | 5871934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4617041 |
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| End bp | 4617988 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549262 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001670360 |
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| Protein GI | 167035129 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ACATCTTCAC CGGCACCATG CCTGCCCTGA TGACCCCGTG CACCGCCGAG
CGCAAGCCGG ACTTCGACGC CCTGGTGCGC AAAGGCCGCG AACTCATCGA AGCCGGCATG
AGCGCCGTGG TGTACTGCGG TTCGATGGGT GACTGGCCAC TGTTGACCGA GGCCGAGCGC
CAGGAAGGCG TGGCGCGCCT GGTGGCCGCC GGCATCCCAA CCATTGTCGG CACCGGCGCG
GTGAACACCC GTGAAGCGGT GTCTCATGCC GCCCACGCAG CCAGCGTCGG CGCCGCCGGC
CTGATGGTCA TCCCCCGCGT GCTCAGCCGC GGCGCTTCGT TGATCGCCCA GAAGCACCAC
TTCTCGGCCA TTCTCGCCGC CGCACCAAAG CTGCCAGCGG TGATCTACAA CAGCCCGTAC
TACGGCTTCG CCACCCGCGC CGACCTGTTC TTCGAGCTGC GCCGCGAGTT CCCCAACCTG
ATCGGTTTCA AGGAATTCGG CGGTGGCGCC GACCTGCGCT ATGCCGCCGA ACACATCACC
TCCAAGGACG ACGATGTGAC CTTGATGGTC GGCGTGGATA CCCAAGTGGT GCACGGCTTC
GTCAACTGCA ACGCCACCGG CGCCATCACC GGCATCGGCA ACGCCCTGCC GCGTGAAGTG
CTGCAGCTGG TGAGCCTGAG CAAGCAGGCG GCCAAGGGCG ACGCCCGTGC CCGCCGCCTG
GCGCGCGAGC TGGAGGCGGC ACTGGCCGTG CTGTCGTCGT TCGATGAAGG TTGCGACCTG
GTGCTGTACT ACAAGCACCT GATGGTGCTG AACGGCGACA CCGAGTACAG CCTGCACTTC
AACCAGACCG ACGTGCTGAC CGACGCCCAG CGCAACTATG CCGAGCAGCA GTACGCGCTG
TTCCGTAGCT GGTACGCCAG CTGGTCGGCC GAGCAGAACC TGGCCTGA
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| Protein sequence | MTDNIFTGTM PALMTPCTAE RKPDFDALVR KGRELIEAGM SAVVYCGSMG DWPLLTEAER
QEGVARLVAA GIPTIVGTGA VNTREAVSHA AHAASVGAAG LMVIPRVLSR GASLIAQKHH
FSAILAAAPK LPAVIYNSPY YGFATRADLF FELRREFPNL IGFKEFGGGA DLRYAAEHIT
SKDDDVTLMV GVDTQVVHGF VNCNATGAIT GIGNALPREV LQLVSLSKQA AKGDARARRL
ARELEAALAV LSSFDEGCDL VLYYKHLMVL NGDTEYSLHF NQTDVLTDAQ RNYAEQQYAL
FRSWYASWSA EQNLA
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