| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4132 |
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| Symbol | |
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| ID | 5871932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4614434 |
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| End bp | 4616047 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549260 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001670358 |
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| Protein GI | 167035127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.402344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGCA AATTCAAAAA ACAGTTATCA CTGCTGGACC TCACCTTCAT CGGCCTAGGC
GCCATCTTCG GCTCCGGCTG GCTGTTCGCC GCCAGCCACG TCTCGGCCAT CGCTGGCCCG
GCTGGCATCC TTTCCTGGTT CCTTGGCGGG TTCGCCGTAC TGCTGCTGGG CATCGTCTAC
TGCGAGCTAG GCGCCGCCCT GCCCCGTGCC GGTGGCGTGG TGCGCTACCC GGTGTATTCG
CACGGCCCAC TGCTGGGCTA CCTGATGGGC TTCATCACGC TGATCGCCTT TTCCAGCCTG
ATTGCCATCG AAGTGGTCGC CTCACGCCAA TACGCCGCCG CCTGGTTTCC CGGGCTGACC
AAGGCCGGCT CCAGTGACCC GACCGTACTC GGCTGGCTGG TGCAGTTCGC CCTGCTGGGG
CTGTTCTTCT TCCTCAACTA CCGCAGCGTG AAAACCTTCG CCAAGGCCAA CAACCTGGTC
AGCGTGTTCA AGTTCATTGT GCCGCTACTG GTGATCGGCG TGCTGTTCAC CTTCTTCAAA
CCAGAAAACT TCGAGGCTCA GGGCTTTGCC CCATTCGGCT TGTCCGGCGT GGAAATGGCC
GTGTCGGCGG GCGGCATCAT CTTCGCCTAC CTGGGCCTGA CGCCGATCAT TTCGGTGGCC
AGCGAAGTGA AGAACCCGCA ACGCACCATC CCGATCGCGC TGATCTTGTC TGTGCTGCTG
TCCACCGCCA TCTACGCCCT GCTGCAACTG GCCTTCCTTG GCAGTGTGCC CACCGAAATG
CTGGCCAACG GCTGGGCCAG CGTGACCAAG GAGCTGGCCC TGCCCTACCG AGATATCGCC
CTGGCCCTGG GTGTGGGCTG GTTGGCCTAC CTGGTGGTGG CCGATGCGGT GATTTCGCCC
AGCGGCTGCG GCAACATCTA CATGAACGCC ACCCCGCGCG TGATCTATGG CTGGGCGCAG
ACCGGCACCT TCTTCAAGTA CTTCACCCGC ATCGACGCAG AATCCGGCAT CCCACGCCCG
GCACTGTGGC TGACCTTTGG CCTGTCGGTG TTCTGGACCC TGCCGTTCCC ATCGTGGGAA
GCGCTGATCA ACGTGGTATC GGCTGCCCTG GTACTGAGCT ACGCCGTCGC CCCGGTCACC
GTCGCCGCCC TGCGCCGCAA CGCGCCAGAC ATGCCGCGCC CGTTCCGGGT CAAGGGCATG
GGCGTGCTCG GCCCGCTGTC GTTCATCATC GCCGCGCTGA TCGTGTACTG GTCGGGCTGG
AACACCGTGT CGTGGTTGCT GGCCCTGCAG ATCGTGATGT TCGTGCTGTA CCTGCTGTGC
GGCCGCTTCG TGCCCACCCA ACACCTGTCG CTGGCCCAGC AAGTACGCTC GTCGGCGTGG
CTGATCGGCT TCTACGCGGT GACCATCCTG CTGTCGTGGC TGGGCAGTTT TGGCGGCCTG
GGCGTGCTAG CCCACCCGTT CGACACCCTG GCCGTGGCCG CCTGCGCGCT GGGCATCTAC
TACTGGGGCG CTGTGACTGG CGTACCTGCC CACCTGGTAC GCCTGGAAGG TGAAGACGAA
AGCGAAGCCA GCGCTGAAAC CTATCCCAGC CGCCCCGCTG CCGTCGCTTC CTGA
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| Protein sequence | MSGKFKKQLS LLDLTFIGLG AIFGSGWLFA ASHVSAIAGP AGILSWFLGG FAVLLLGIVY
CELGAALPRA GGVVRYPVYS HGPLLGYLMG FITLIAFSSL IAIEVVASRQ YAAAWFPGLT
KAGSSDPTVL GWLVQFALLG LFFFLNYRSV KTFAKANNLV SVFKFIVPLL VIGVLFTFFK
PENFEAQGFA PFGLSGVEMA VSAGGIIFAY LGLTPIISVA SEVKNPQRTI PIALILSVLL
STAIYALLQL AFLGSVPTEM LANGWASVTK ELALPYRDIA LALGVGWLAY LVVADAVISP
SGCGNIYMNA TPRVIYGWAQ TGTFFKYFTR IDAESGIPRP ALWLTFGLSV FWTLPFPSWE
ALINVVSAAL VLSYAVAPVT VAALRRNAPD MPRPFRVKGM GVLGPLSFII AALIVYWSGW
NTVSWLLALQ IVMFVLYLLC GRFVPTQHLS LAQQVRSSAW LIGFYAVTIL LSWLGSFGGL
GVLAHPFDTL AVAACALGIY YWGAVTGVPA HLVRLEGEDE SEASAETYPS RPAAVAS
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