| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4122 |
|---|
| Symbol | |
|---|
| ID | 5871922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4603300 |
|---|
| End bp | 4604937 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641549250 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001670348 |
|---|
| Protein GI | 167035117 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACT TCAAATCCCT GCGGACTGAA TGGGTCACGC TGCTGGCCAG CCTTTACCTG
CTGATCGGCT TCAACATGTT CCTTTGGGGG CATCTGCAAG AGATTGTGCC CGCCGGCCTG
TCGGGGCTCT GGCTGAGCCT GGCGTTTGCC GTGCTGATGC TGTTCGCTTT CAATCTAATC
CTCACGTTGT TTGCCTTCCG CTATGTATTG AAGCCGGTAC TTATCGTGTT GTTCATGAGT
GGCGCGGGTG TGGCTTACTT CATGAATCAG TACGGCGTAC TTATTGACTC TGGCATGTTC
CGTAATATGG CCGAGACCAA TGTTGCGGAA GTGCGCGACC TGATGTCGTT CAAGTTTGCC
GCCTATATTC TGCTGCTGGG CGTACTGCCT TCGGTTCTGT TGTGGAAAGC GCCGATCGCC
TACCGTGCCT GGCACCGCGA GCTGCTGGGC AAGCTGGTGG TCAGCGGTGC CTGCGTGGTG
GCCCTCGGCT CGGTAGCGTT GGTCAATTAT CAAGGGTTGT CGTCGCTGTT TCGCAATCAC
CATGAACTGC GCCTGATGCT GACCCCAAGC AATATCGTCG GGGCCTCCAT TGGTTATGTC
AGCGAGCGTG TCGGTACCGC CTCGCGCCCG TTCCAGAATT ATGGCGAAGA TGCCAAGCGT
GATGCAGCCT GGCAAAAACA TGAGCGCAAG TCGCTGACCG TGCTGGTGGT TGGGGAAAGT
GCCCGGGCAG ACCATTTCGG TGTGCTGGGC TACGACCGCG ACACCACGCC GAACCTCGCC
AAGCAACAGG GCTTGCTGGC GTTTTCCGAC GTGCACTCGT GCGGTACGGA AACGGCGGTC
TCGGTGCCGT GCATGTTCTC TGGCATGACG CGCAAGGACT ACGATGCCCG CGTGGCCAAG
AACCGCGAAG GGCTGCTGGA CATCCTCCAG CGTGCCGGCC TGGCCGTGCA GTGGCGTGAC
AACCAGTCGG GTTGCAAGGG TACCTGCGAC CGGGTGCAGT TCATCGATGT CAGCAATCTC
AAGGACCCGC AACTGTGTGC CAATGGCGAA TGCCATGACC AAATCCTGCT GCAGGGCCTG
GACGAGCTGA TCGACAACCT CGACAAGGAC ACCGTGCTGG TGCTGCACCA GATGGGCAGC
CACGGCCCCG AGTATTTCAA GCGCTACCCC AGTGGCGAAG AACGCTTCAC CCCGGTGTGC
CAGAGCAACG CGCTGAACCA GTGCAGCGAG CAGGAAATCA TCAACGGCTA CGACAACACC
CTGGCCTATA CCGACAAGGT GCTGGCCTCA CTGATCGACA CCCTGCGCAG CAAGCAGGAC
AAGGTCGACA CGGCGATGAT CTACCTGTCC GACCATGGCG AGTCGCTGGG TGAGTACAAC
CTGTTCCTGC ACGGCACGCC GTACGCCATT GCCCCCGAGC AGCAGAAGCA CGTACCGCTG
CTGACCTGGT TCTCCGACAG CTACAAGGAA GACTTTGGCA TCGATACCGA CTGCCTGGCC
AAGCTCAGCG ATGCCCCGCT GTCGCAGGAC AACCTGTTCC ATTCGATGCT CGGCCTGTTG
CAGGTGCGCA CCGAGGTCTA CCGGCAGTCG CTGGACATGT TCGCCAGTTG CCGGCCTTGG
CTGGCGGCCA AGCGCTGA
|
|---|
| Protein sequence | MLNFKSLRTE WVTLLASLYL LIGFNMFLWG HLQEIVPAGL SGLWLSLAFA VLMLFAFNLI
LTLFAFRYVL KPVLIVLFMS GAGVAYFMNQ YGVLIDSGMF RNMAETNVAE VRDLMSFKFA
AYILLLGVLP SVLLWKAPIA YRAWHRELLG KLVVSGACVV ALGSVALVNY QGLSSLFRNH
HELRLMLTPS NIVGASIGYV SERVGTASRP FQNYGEDAKR DAAWQKHERK SLTVLVVGES
ARADHFGVLG YDRDTTPNLA KQQGLLAFSD VHSCGTETAV SVPCMFSGMT RKDYDARVAK
NREGLLDILQ RAGLAVQWRD NQSGCKGTCD RVQFIDVSNL KDPQLCANGE CHDQILLQGL
DELIDNLDKD TVLVLHQMGS HGPEYFKRYP SGEERFTPVC QSNALNQCSE QEIINGYDNT
LAYTDKVLAS LIDTLRSKQD KVDTAMIYLS DHGESLGEYN LFLHGTPYAI APEQQKHVPL
LTWFSDSYKE DFGIDTDCLA KLSDAPLSQD NLFHSMLGLL QVRTEVYRQS LDMFASCRPW
LAAKR
|
|---|
| |