Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4118 |
Symbol | |
ID | 5871918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4600150 |
End bp | 4600743 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549246 |
Product | nitroreductase |
Protein accession | YP_001670344 |
Protein GI | 167035113 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCA ACCCCCGCAT TGCCGATTAC GCCATCAACG AGCAGTTCAT CAACCGCTGG TCGCCACGCG CCTTTACCGC CGAGCCAATC AGCGAAGAAA CCCTGCTGAG CTTCCTTGAA GCCGCCCGTT GGGCACCGTC GGCGTACAAC TCGCAGCCTT GGCGCTTCCT TTATGCCCGC CGTGACACGC CGAGCTGGGA GCGCTACCTG AGCCTGCTGG TGCCGTTCAA CCGTAGCTGG GCGCAACAGG CGTCGGCACT GGTGCTGGTC ATTTCCAAGA CCACGTTCGC GGCCCCAGGC GCTACGGAAG AAAAACCGGC GCTGTGGCAC ACCTTCGACA CCGGCTCCGC CTGGGGGCAC CTGGCGCTGC AAGCCAGCAT CAGCGGCTGG CATACCCATG GCATGGCCGG CTTCGACCAG GACCTGGCGC GTCAGGAACT GAAGATTCCT GAAGGCTATG TGCTGCATGC CATGGTGGCG ATCGGCAAGC TGGGTGACAA GGCCAGCCTG GACGAGGCGC TGCAGGCGCG TGAAGTACCG AGCCCACGCA AGCCGTTGAG CGAGCTGGCG GCCGAGGGCG ATTTCAGCCT GTAA
|
Protein sequence | MSANPRIADY AINEQFINRW SPRAFTAEPI SEETLLSFLE AARWAPSAYN SQPWRFLYAR RDTPSWERYL SLLVPFNRSW AQQASALVLV ISKTTFAAPG ATEEKPALWH TFDTGSAWGH LALQASISGW HTHGMAGFDQ DLARQELKIP EGYVLHAMVA IGKLGDKASL DEALQAREVP SPRKPLSELA AEGDFSL
|
| |