| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4105 |
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| Symbol | |
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| ID | 5871905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4586310 |
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| End bp | 4588352 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549233 |
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| Product | oligopeptidase B |
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| Protein accession | YP_001670331 |
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| Protein GI | 167035100 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACA AGCCTCAGCC GCCCATCGCC CACGCCGATA ACGCCGCCGA CCCGTACGCC
TGGCTGCAAC AGCGCGACAC TCCCGAGGTA CTCGCCTACC TGCAAGCCGA AAACGCCTAC
CAGGAAGCCT GCCTGGCCGA CCAGGCAGCG TTGCGTGAGC AGTTGTTCGA AGAGATCAAG
GGTCGCATCC TGGAAACCGA CCTGTCGCTG CCGTCGCCCT GGGGCCCCTA CCTGTACTAC
ACCCGCACCA CCGCCGGCGA CGAGTACCCA CGTCACTACC GCTGCCCACG CCCTGCCGAC
GATTCGAACA CCGTCGATGA AAGCCAGGAG CAACTGCTGC TCGACCCCAA CGCCCTGGCC
AATGGCGGCT TCCTGTCGCT GGGGGCGTTC AACGTCAGCC CCGACCACCG CCTGCTGGCC
TACAGCCTCG ACACCAGTGG CGACGAAATC TACACCCTGT ACGTCAAGGA CTTGGCCAGT
GGCAGCGTCA CGCCCCTGCC CTTCGACGAC TGCGACGGCA GCCTGACCTG GGCCAACGAC
AGCCAAACGC TGTTCTTCGC CGAACTGGAC GACACCCATC GGCCATGGCG CCTGCATCGC
CACACCCTGG GCACTGACGC CGTGCAGACC GTGTTCGAAG AGCCCGACGG GCGCTTCTTC
CTGCACTGCT ATCGCACCAG CTCCGAGCGC CAACTGGTGC TGCTGCTGAA CAGCAAGACC
ACCAGCGAAG CCTGGGTACT GGACGCCGAA ACCCCGCAGG CGCCGTTCAC CTGCCTGGCG
CCGCGTGTCG AAGGCCATGA ATATTTCCCC GACCATGGCC AGCTCGACGG CGAGTGGCGC
TGGTTCATCC GTACCAACCA GGACGGCATC AACTTCGCTC TTTACCATGC CCCTGTCGCG
CCAGTGCCAG GCCGTGAGCA ATGGCAGGTG CTGGTGGCGC ACCGCGACGC AATCATGCTC
GAAGGCCTCA GCCTCAATGC CAGCGCCCTC ACCCTGAGCC TGCGTGAAGG CGGCCTGCCA
ATCATCGAAG TACGCCCGCA GGGGCTGTCG GCCTATCGCG TCGAGCTACC CGACGCCGCC
TACAGCCTGT ACGTACAGGA CAGCCTGGAG TTCGTCAGCA CACGCGTGCG CCTGCGCTAC
GAAGCCCTCA ATCGCCCGGC CCAGGTGCGC CAGCTGGAGC TGGCCACGGG CGCGCAGGTT
GTGCTCAAGC AAACCCCGGT GCTGGGTGCG TTCGATGCCG ATGACTATGT CAGCGAGCGC
CTGTGGGCGA CTGCGGCGGA CGGCACCCAG GTGCCGATCA GCCTGGTACG CCGTCGCCGC
GACCAGGGCA AGACCGTGCC GCTGTACCTG TACGGTTACG GCGCCTATGG GGAAAGCCTC
GACCCGTGGT TCTCCCATGC GCGCCTGAGC CTGCTGGAGC GTGGCGTGGC CTTTGCCATC
GCCCACGTGC GCGGCGGCGG TGAACTGGGT GAAGCCTGGT ACCGCGCGGG CAAGCAGGAG
TACAAGCACA ACACCTTCAG CGACTTCATC GCCTGCGCCG AGCACCTGAT CGCCAAAGGC
GTGACGGCTG CCGATCGCTT GGCCATCAGC GGCGGCAGCG CCGGCGGCCT GCTGATCGGC
ACGGTGCTCA ACCTGCGCCC CGAGCTGTTC CGCTGCGCGA TTGCCGAAGT GCCGTTCGTC
GACGTGCTCA ACACCATGCT CGACCCCGAG CTACCGCTGA CCGTGACCGA ATACGACGAA
TGGGGCAACC CAGAGGAACC GCAGGTTTAC GAGCGCATCA AGGCGTATGC ACCTTATGAG
AACGTAAAGG CCCAGGACTA TCCAGCGATG CTGGTGGTGG CGGGTTACAA CGACAGCCGC
GTGCAGTACT GGGAAGCGGC CAAATGGGTG GCGCGGTTGC GTACGCGCAA GACCGACGAC
CACCTGCTGC TGCTCAAGAC CGAAATGGGC GCAGGGCATG GCGGGATGAG CGGGCGATAC
CAAGGGCTGA AGGATGTGGC GCTGGAATAT GCGTTCGTAT TCGGCGAGCT GGGTATCGTT
TGA
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| Protein sequence | MPNKPQPPIA HADNAADPYA WLQQRDTPEV LAYLQAENAY QEACLADQAA LREQLFEEIK
GRILETDLSL PSPWGPYLYY TRTTAGDEYP RHYRCPRPAD DSNTVDESQE QLLLDPNALA
NGGFLSLGAF NVSPDHRLLA YSLDTSGDEI YTLYVKDLAS GSVTPLPFDD CDGSLTWAND
SQTLFFAELD DTHRPWRLHR HTLGTDAVQT VFEEPDGRFF LHCYRTSSER QLVLLLNSKT
TSEAWVLDAE TPQAPFTCLA PRVEGHEYFP DHGQLDGEWR WFIRTNQDGI NFALYHAPVA
PVPGREQWQV LVAHRDAIML EGLSLNASAL TLSLREGGLP IIEVRPQGLS AYRVELPDAA
YSLYVQDSLE FVSTRVRLRY EALNRPAQVR QLELATGAQV VLKQTPVLGA FDADDYVSER
LWATAADGTQ VPISLVRRRR DQGKTVPLYL YGYGAYGESL DPWFSHARLS LLERGVAFAI
AHVRGGGELG EAWYRAGKQE YKHNTFSDFI ACAEHLIAKG VTAADRLAIS GGSAGGLLIG
TVLNLRPELF RCAIAEVPFV DVLNTMLDPE LPLTVTEYDE WGNPEEPQVY ERIKAYAPYE
NVKAQDYPAM LVVAGYNDSR VQYWEAAKWV ARLRTRKTDD HLLLLKTEMG AGHGGMSGRY
QGLKDVALEY AFVFGELGIV
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