| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4096 |
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| Symbol | |
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| ID | 5871896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4578780 |
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| End bp | 4579697 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549224 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001670322 |
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| Protein GI | 167035091 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.288136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGT TGAAGATCGA GGCCAGTACG CCGTTGTGTC AGTTGCAGGA CGCCGGGCGT
TTCGGCGTAC GCCATCTGGG GGTGACCCAG GGCGGCGCGT TGGACTGGGT GGCGATGCAC
TGGGCCAACT GGCTGCTGGG CAACCCGTTG GACGCGCCGG TTGTCGAGGT GGCGCTGGGA
GGTTTTTGTG CAGTGGCGGA GCAGGATTGT GTGCTGGCGC TGGCCGGTGC CGACCTGGAC
GCGCGCGTCG ATGATCAGCC GATCGCACCT TGGCGCAGCT TTGCTCTGGG CCAGGGGCAG
CGCCTGACCC TGAAGCAGCC CAGGCAGGGT GTGCGGGCAT ACCTGGCGGC ACCGGGTGGG
TTCAGGGGCG AGGATGTACT GGGCAGTTGT GCCACGGTGG TCCGTGAAGA ACTGGGTGGC
ATCGATGGCC AGGGTGCCGC GTTGGCTAAA GGCCAGGCAT TAAGTTTCAC CGGCAGCGAT
GCAACCCTGC GCGAGGTGCC GCACGCACTG CGTCCACAGT ACCCGCAAAA GCCTGTGCTT
GACCTGGTGA TGGGCGCGCA GATCGGTGAA TTCAGCGGTA CCAGCCTGTT CGAGGCCTTC
AACCGGGAGT GGACACTGGA CAGCCGGGCG GACCGCATGG GTATCCGTCT GTTGGGGCCG
CAGCTGGTCT ATCAGGGTGC ACCGATGATT TCCGAAGGGA TACCGCTGGG GGCGGTGCAG
GTACCGCCGG ATGGGCAGCC GATCGTGTTG CTCAATGACC GGCAGACCAT TGGCGGTTAT
CCGCGGCTGG GGGCGTTGAC GCCGTTGGCG CTGGCGCAGC TGGCGCAGTG CATGCCAGGG
ACGGTGGTGC GGTTCAAGGC GGTGGTGCAG GACGAGGCTT GGCGGGAGCA CCAGGTTTAC
CTGGATCGTT GGCGGTGA
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| Protein sequence | MTQLKIEAST PLCQLQDAGR FGVRHLGVTQ GGALDWVAMH WANWLLGNPL DAPVVEVALG
GFCAVAEQDC VLALAGADLD ARVDDQPIAP WRSFALGQGQ RLTLKQPRQG VRAYLAAPGG
FRGEDVLGSC ATVVREELGG IDGQGAALAK GQALSFTGSD ATLREVPHAL RPQYPQKPVL
DLVMGAQIGE FSGTSLFEAF NREWTLDSRA DRMGIRLLGP QLVYQGAPMI SEGIPLGAVQ
VPPDGQPIVL LNDRQTIGGY PRLGALTPLA LAQLAQCMPG TVVRFKAVVQ DEAWREHQVY
LDRWR
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