Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4095 |
Symbol | |
ID | 5871895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4577550 |
End bp | 4578728 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641549223 |
Product | hypothetical protein |
Protein accession | YP_001670321 |
Protein GI | 167035090 |
COG category | [S] Function unknown |
COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0303832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCA ACCTGTTCAA TGAAATGCGT GCGGCCAAGG TGCCGGTATC GGTACGCGAG TTGCTGGACC TGCATCAGGC CCTGCAAAAG CACGTGGTGT TCGCCGACAT GGACGAATTC TACTACCTCG CCCGCGCCAT CCTGGTGAAG GACGAACGCC ATTTCGACAA GTTCGACCGG GCCTTTGCCG CCTACTTCAA AGGCCTGGAA AACCTCGACC GGCATATCGA GGCACTGATC CCCGAAGACT GGCTGCGCAA GGAGTTCGAG CGCTCGCTGA GCGAGGAGGA ACGCGCGCAG ATCCAGTCGC TGGGCGGCCT GGACAAGCTG ATCGAGGCAT TCAAGAAACG CCTTGAAGAG CAAAAGGAAC GCCACGCTGG CGGCAACAAG TGGATCGGTA CCGGCGGCAC CAGCCCGTTC GGCTCGGGCG GTTTCAACCC CGAAGGCATT CGCGTTGGCG AGGCCGGTAA ACGCCAAGGC AAAGCGGTAA AGGTGTGGGA CCAGCGCGAG TACAAGAACC TCGACGATCA GGTGGAACTG GGCACACGCA ACATCAAGCT GGCCCTGCGC CGGCTGCGCA AGTTCGCCCG TGAAGGCGCC GCCGAAGAGC TGGACATCGA CGGCACCATC GACCACACCG CGCGTGACGC CGGGTTGCTG AACATCCAGA TGCGCCCGGA ACGGCGCAAC ACCGTCAAGC TGCTGTTGCT GTTCGATATC GGCGGCTCGA TGGACGCCCA CATCAAGGTC TGCGAAGAGC TGTTCTCAGC CTGTAAAACC GAGTTCAAGC ACCTGGAGTA CTACTACTTC CACAACTTCC TCTACGAGTC GGTGTGGAAG AACAACCTGC GCCGCACCTC GGAGCGGTAT TCCACCTTCG ACCTGCTGCA CAAGTATGGC GACGACTACA AAGTGATTTT CGTCGGCGAC GCGGCCATGG CGCCCTACGA AATCACCCAG CCAGGTGGCA GCGTGGAGCA CTGGAACGAA GAGGCCGGGT ACGTGTGGAT GCAGCGGTTC ATGGAGAAAT TCAGGAAGAT CATCTGGATC AACCCGTATC CGAAGCAAGC CTGGGATTAC ACGGCTTCGA CCCATCTGGT GAGGGACTTG ATCGAGGACA AGATGTACCC GTTGACCTTG CAGGGGTTGG AGGAAGGGAT GCGGTATCTG TCCAAGTGA
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Protein sequence | MLLNLFNEMR AAKVPVSVRE LLDLHQALQK HVVFADMDEF YYLARAILVK DERHFDKFDR AFAAYFKGLE NLDRHIEALI PEDWLRKEFE RSLSEEERAQ IQSLGGLDKL IEAFKKRLEE QKERHAGGNK WIGTGGTSPF GSGGFNPEGI RVGEAGKRQG KAVKVWDQRE YKNLDDQVEL GTRNIKLALR RLRKFAREGA AEELDIDGTI DHTARDAGLL NIQMRPERRN TVKLLLLFDI GGSMDAHIKV CEELFSACKT EFKHLEYYYF HNFLYESVWK NNLRRTSERY STFDLLHKYG DDYKVIFVGD AAMAPYEITQ PGGSVEHWNE EAGYVWMQRF MEKFRKIIWI NPYPKQAWDY TASTHLVRDL IEDKMYPLTL QGLEEGMRYL SK
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