| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4094 |
|---|
| Symbol | |
|---|
| ID | 5871894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4576691 |
|---|
| End bp | 4577536 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641549222 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001670320 |
|---|
| Protein GI | 167035089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.271648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCG AAGGCACCCG CGACTACGTC GCCACAGACG ACCTGAAACT GGCGGTAAAT
GCGGCTATCA CCCTCGAACG CCCGCTGCTG GTCAAGGGTG AACCGGGCAC CGGCAAGACC
ATGCTCGCCG AGCAGTTGGC CGCCTCGTTC GGCGCTCGCC TGATCACCTG GCACATCAAG
TCCACCACCA AGGCCCACCA AGGGCTGTAC GAGTACGACG CAGTCAGCCG CCTGCGCGAT
TCGCAGTTGG GCGTGGACAA GGTGCACGAT GTGCGCAATT ACCTGAAAAA GGGCAAGCTG
TGGGAGGCCT TCGAGGCCGA AGAGCGGGTG ATTCTGCTGA TCGACGAAAT CGACAAGGCC
GACATCGAGT TCCCCAACGA CCTGCTGCAA GAACTCGACA AGATGGAGTT CTACGTCTAC
GAAATCGACG AGACCATCAA GGCCAAGCAA CGCCCGATCA TCATCATTAC CTCGAACAAC
GAAAAAGAGC TGCCGGACGC TTTCCTGCGC CGCTGCTTCT TCCACTACAT TGCCTTCCCC
GACCGCACCA CCTTGCAGCA GATCGTCGAC GTGCATTACC CGAACATCAG CCAGTCGCTG
GTCAGTGAGG CGCTGGATGT GTTCTTCGAC GTACGCAAAG TGCCGGGCCT GAAGAAAAAG
CCGTCCACCT CCGAGCTGGT CGACTGGCTC AAGTTGCTGA TGGCCGACAA TATCGGTGAA
GCGGTGTTGC GCGAACGCGA CCCGACCAAG GCCATTCCGC CGCTGGCCGG TGCGCTGGTG
AAGAACGAGC AGGACGTGCA ACTGCTCGAG CGCCTGGCCT TCATGAGCCG GCGCGGCAAC
CGCTGA
|
|---|
| Protein sequence | MKFEGTRDYV ATDDLKLAVN AAITLERPLL VKGEPGTGKT MLAEQLAASF GARLITWHIK
STTKAHQGLY EYDAVSRLRD SQLGVDKVHD VRNYLKKGKL WEAFEAEERV ILLIDEIDKA
DIEFPNDLLQ ELDKMEFYVY EIDETIKAKQ RPIIIITSNN EKELPDAFLR RCFFHYIAFP
DRTTLQQIVD VHYPNISQSL VSEALDVFFD VRKVPGLKKK PSTSELVDWL KLLMADNIGE
AVLRERDPTK AIPPLAGALV KNEQDVQLLE RLAFMSRRGN R
|
|---|
| |