| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4074 |
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| Symbol | |
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| ID | 5871874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4528553 |
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| End bp | 4529071 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549202 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001670300 |
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| Protein GI | 167035069 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.240702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.858688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACAAGG TCCCGCCTGC ACCGCACGAT GACATGCACT GCCTGTACCG CGACCACAGC
GGCTGGCTGC AAGGCTGGCT GCGCCGGCGT CTGGGCGATC GCGAGCGGGC GGCGGACCTG
ACCCATGACA CGTTCCTGCG CCTGATCGCC AGCACGGTGG CCCACCCGCT GCGCGAGCCG
CGTCATTTTC TGGCGACGGT GGCCAAGCGG GTGATGGTCG ACCATTTGCG CCGGCGCTCG
CTGGAGCAGG CCTATCTGGA AGCCTTGGCG CTGGAGCCAG AACTGGTTGA GGCGTCACCC
GAGCAACGGG TGCTGCTGCT GGAAACGCTG TTGCAACTCG ATGCCATGCT CGATGGCCTG
AACCACAAGG TGCGCCAGGC GCTGTTTCTT TCCCACCTCG AAGGCTTGAG CTACGCCGAA
ATTGCCGAAC GCCTTGGGGT GTCTGTCAGT TCGGTGACCA AATACATCGC CAAGGCCACC
GAGCAGTGCC TGCTGTTTGC GCTGGATGCC GAGCGGTGA
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| Protein sequence | MYKVPPAPHD DMHCLYRDHS GWLQGWLRRR LGDRERAADL THDTFLRLIA STVAHPLREP
RHFLATVAKR VMVDHLRRRS LEQAYLEALA LEPELVEASP EQRVLLLETL LQLDAMLDGL
NHKVRQALFL SHLEGLSYAE IAERLGVSVS SVTKYIAKAT EQCLLFALDA ER
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