| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4072 |
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| Symbol | |
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| ID | 5871872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4525043 |
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| End bp | 4527496 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641549200 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001670298 |
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| Protein GI | 167035067 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCC GCGTTACCCC TCACTGCTAC CCCAGAAAAC CCCTCGTCGT TGCCATGTTC
AGTGCCGCCT TGCTGCTGCA GGCCACGGTG ATTCATCCGC TGAGTGCGGC AGGGCAGGCC
CGTGCCGTCG AAGCCACTCG CAGCTATGCC ATTGCCAGCG GGCCATTGGG CGCGGTGCTC
AGCCGCTTTG CCAGCGATGC CGGGGTGGTG CTGTCGTTCG AGGCCGAGCT GACCCAGGGT
AAGCACAGTA CGGGTTTGCA GGGGACATAC AGTGTCGACC AAGGGTTTGC CCGGTTGCTG
GCAGGGAGCG ATCTACAGGT GATGGCCGCC AGTAATGGAA ATTACCTGCT TTTGCCGCGT
ACGAAGGATG GCGCACTCGA GCTGGGCGCA ACCAGCATCA ATGCCTCGGG CCTGGGGGCT
ACGACGGAAG GGATGGGGTC TTATACGACC GGGTCGACCA ATACGGCGAC CAAGATGAAC
CTGTCGATTC GAGAGACACC GCAGACGATT AGCGTCATTA CCCGCCAGCG CATGGATGAC
CAGCAACTGC ATACCATGAG CGAAGTGCTG ACACAGGCCC CCGGAATTAC CATGTCCCAG
GACGGCGGCG AGCGCTTCAA TATCTATTCA CGCGGCAGCC AGATCAATAC TTACCAGATT
GATGGGGTGA CCACGACGCA GGAAAACCAG ACACGCACCA TGCCTGGCAC CTTGTTGGAC
ATGGCCCTGT ACGACCACGT GGAAATTGTG CGTGGTGCTA CCGGCCTGAT GACCGGTGCA
GGCGACCCCA GCGGCGTAGT CAACGTCATT CACAAGCGCC CGACTGCGTA TTTTCAATCC
TACGTGCAAG GCACAATCGG CTCTTGGGAC TACAACCGCC TCGAAGCAGA CGTCTCCGGT
CCGCTGATCG ACAGCGGCAA GCTGCGTGGC CGCTTCGTGG CTGCCAAGCA GGACAACAAC
ACCTTCATGG ACTGGTACAG CCAGGATAAG AACATTGCCT ATGGCGTCAT CGAAGCCGAT
GTTACCGATA CCACCTTGGT GCGTTTCGGC GTCGACTATC AGACCTACAA GGCCACTGGC
GCCCCTGGCG TACCCTTGAT GTACAACAAT GGCCAGCAAA CCAACTTCTC GCGCTCGACC
AGCGCCGGGG CACGCTGGGC CTACGATGAC TATGAAACCT TCAACTACAC CATCAATGTC
GAACAGCAGC TTGCCAACGA TTGGCAGTTG AAAGTGGCCG CAAACTACAT GGACGTAGAC
CGGGACGTCG GCGTAGCCTA CTACGCAACC AACAGCCTGA CCTCCAGCCT GGACCCGGCA
ACCAACCGTG CTAACGCTGA GCGAGGGAAA TCGTGGGCTG ACCAGACCCA AAAAGGGGTG
GACGTGACCC TGCAAGGGCC ATTTCAAGCG TTTGGACAGA CCCACGAGCT GATAATCGGC
TACAACTACC AGCAATATGA CAACACGCAC TTTTCCTACA CCGGCGGCAC CCAAGGTTTC
GATTTCGATA CGTGGGATAA CGAACTGCCG AAACCGGCCA GCTACACGCC ACTGCTGGAC
TTCAACATCA ACTCACGGCA AAGCGGTTAC TTTGCGGCAA CACGCCTCAA CTTCACCGAT
GATCTCCACG TGATCCTGGG GGCGCGCGGC AGCAACTACG AATACAACTA TTACTCTAAG
GTGCTCAATG CCATCCCCGA ACGGGACCCT ACCGTGTATG GAATGCGCGA ACGTGGCGTG
GTCACACCCT ATGCCGGCAT CGTCTACGAC TTGACGCCTG AGCAATCGGT TTATGTCAGC
TACACCGACA TTTTCAAACC GCAATCGAAC CGGGACATCG ACAACAAACC ACTGGATCCC
GTGGAAGGCA CCAACTACGA GGCCGGTTGG AAGGGGGAGT TCTTCGACCG CCGCCTCAAT
GCCAACGCCG CGATCTACTA CATCAAGCGT GACAATCTGG GTGTTGCCAC GGGCGAGACG
ATTCCAGGTA CCAGCGACAT CGCCTATAAA GCTGTCAGTG GTGCCGAAAC CAAAGGTGTC
GACCTGGAGC TTTCCGGCGA GGTACTGCCA GGCTGGAGCG TACAATCCAG CTACAGCTGG
TCCCGTACCG AAGACTCCGA TGGCAACCGC CAGCTGACCC AGTTGCCCAC AGACACGTTG
CGTTTCTGGA CTACCTACCG CCTGCCTGGC GAATGGGACA AGCTCACCGT CGGCGGTGGC
GTCAACTGGA ACTCGGGTAC GTCACTGTAC TTTAGCCGCT ACCAGACTCG GGCTAAACAG
GATGACTACT ATGTGGCCAG CCTGATGGCA CGCTACCAAG TCACCGATCA CCTCAGCACC
ACCCTCAATA TCAACAACCT GTTCGACGAA AAGTACTATG CGGGCTTTGC TGGCAACTAC
GGGCACTACG GTGCACCGCG TAACGCCATG TTGAACCTGC GCTACGATTT CTGA
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| Protein sequence | MPRRVTPHCY PRKPLVVAMF SAALLLQATV IHPLSAAGQA RAVEATRSYA IASGPLGAVL
SRFASDAGVV LSFEAELTQG KHSTGLQGTY SVDQGFARLL AGSDLQVMAA SNGNYLLLPR
TKDGALELGA TSINASGLGA TTEGMGSYTT GSTNTATKMN LSIRETPQTI SVITRQRMDD
QQLHTMSEVL TQAPGITMSQ DGGERFNIYS RGSQINTYQI DGVTTTQENQ TRTMPGTLLD
MALYDHVEIV RGATGLMTGA GDPSGVVNVI HKRPTAYFQS YVQGTIGSWD YNRLEADVSG
PLIDSGKLRG RFVAAKQDNN TFMDWYSQDK NIAYGVIEAD VTDTTLVRFG VDYQTYKATG
APGVPLMYNN GQQTNFSRST SAGARWAYDD YETFNYTINV EQQLANDWQL KVAANYMDVD
RDVGVAYYAT NSLTSSLDPA TNRANAERGK SWADQTQKGV DVTLQGPFQA FGQTHELIIG
YNYQQYDNTH FSYTGGTQGF DFDTWDNELP KPASYTPLLD FNINSRQSGY FAATRLNFTD
DLHVILGARG SNYEYNYYSK VLNAIPERDP TVYGMRERGV VTPYAGIVYD LTPEQSVYVS
YTDIFKPQSN RDIDNKPLDP VEGTNYEAGW KGEFFDRRLN ANAAIYYIKR DNLGVATGET
IPGTSDIAYK AVSGAETKGV DLELSGEVLP GWSVQSSYSW SRTEDSDGNR QLTQLPTDTL
RFWTTYRLPG EWDKLTVGGG VNWNSGTSLY FSRYQTRAKQ DDYYVASLMA RYQVTDHLST
TLNINNLFDE KYYAGFAGNY GHYGAPRNAM LNLRYDF
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