| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4067 |
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| Symbol | |
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| ID | 5871867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4520580 |
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| End bp | 4521539 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549195 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001670293 |
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| Protein GI | 167035062 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTCC CCGACCTGCG CGGCCTGCCC CTGCACCGCG TGCTGGTACG CACCGTCAAG
GAATTCCTCG ACGACGAGAT GTCCACCTAT GCCTCAGCGC TGGCGTATCA GGCGCTGTTC
TCGCTGTTCC CCTTCCTGTT GTTTCTGATT GCCCTGATCG GCTTTCTGCA CTTGCCGGAC
TTCTTCTCCT GGCTGCGCTT GCAGTCGGAA CTGGTGTTAC CGCCCCAGGC GCTGGAGCAG
GTCAACCCGG TAATCGACCA GCTGCAGCAG TCCAAGGGCG GGCTGTTGTC GGTAGGTATC
GTGATTGCCT TGTGGACTGC CTCTGCCGGC GTGCGCTTGA TGATGAGCGC CATGAACGCC
GCCTACGACG TGCCTGAAGG CCGCCCGGTG TGGAAGCGCA TCCCGCTGTC CATTTTCTAC
ACCGTGGGCC TGGCCGGTAT GCTGCTGGCG GCCGCGGCAC TGATGGTGCT GGGCCCTCAG
GTGATGGAGT GGATCGCTGC CCAGATCGGT ATGCAGGAGT TCATCGTCAC CCTGTGGACC
ATCCTGCGCT GGCCGGTGAT CATCATCCTG TTGATGGTGG CGGTGGCGCT GATCTACTAC
GTGATGCCCG ACGTGAAACA GAAGTTTCGC TTCATCACCC CAGGCTCGGT GCTGGCGGTG
GTGGTGTGGA TCGTGGCCTC ACTGGGCTTT GCCTATTACG TGAAGACCTT TGCCGACTAC
AACGCCATGT ACGGCAGCAT TGGTGCAATC ATCGTGCTGT TGCTGTATTT CTATATCTCG
GCCGCCGTGC TGCTGCTCGG CGCCGAAATG AATGCGGTGA TCGAGCACAT GTCAGCCGAA
GGCAAGAACC CGGGCGAAAA AGACTTCGAC GGGGAAAAGC CCAAGGAAAC CTTGACGGTA
CTGGGCCACG AGCACCCGAA CCCGAGCGAG CCTCATACCG TCGAGCCGAA CCCCCGATGA
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| Protein sequence | MIFPDLRGLP LHRVLVRTVK EFLDDEMSTY ASALAYQALF SLFPFLLFLI ALIGFLHLPD
FFSWLRLQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSVGI VIALWTASAG VRLMMSAMNA
AYDVPEGRPV WKRIPLSIFY TVGLAGMLLA AAALMVLGPQ VMEWIAAQIG MQEFIVTLWT
ILRWPVIIIL LMVAVALIYY VMPDVKQKFR FITPGSVLAV VVWIVASLGF AYYVKTFADY
NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKNPGEKDFD GEKPKETLTV
LGHEHPNPSE PHTVEPNPR
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