| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4057 |
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| Symbol | |
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| ID | 5871857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4512948 |
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| End bp | 4514636 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549185 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001670283 |
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| Protein GI | 167035052 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG AATTCTGGAA TGACAAGCGC CCGGCGGGCG TGCCTTCCAC CATCGACATC
AACGCCTACG CCTCGGTCGT CGAGGTGTTC GAACGCTCCT GCAAGCGCTT TGCCGACCGC
CCGGCGTTCA GCAATCTGGG CGTGACGCTG AGTTATGCCG AGCTGGAGCG CCATTCGGCA
GCCTTCACTG CCTGGTTGCA GCAGCACACC GACCTCAAGC CGGGTGACCG CATCGCGGTG
CAGATGCCCA ATGTGCTGCA GTACCCCATC GCCGTGTTCG GTGCCATGCG CGCCGGGCTG
ATCGTGGTCA ACACCAACCC GCTGTACACC GAGCGCGAGA TGCGCCACCA GTTCAAGGAC
AGCGGCGCCC GTGCGCTGGT GTACCTGAAC ATGTTCGGCA AGCGCGTGCA GGAAGTGCTG
CCCGATACCG GTATCGAATA CCTGATCGAG GCGAAGATGG GCGACCTGCT GCCCACCGCC
AAGGGCTGGC TGGTCAACAC TGTGGTCGAC AAGCTGAAGA AGATGGTGCC GGCCTACAAT
TTGCCCCAGG CGGTGCCGTT CAAGCAGGTG CTGCGCGAGG GCCGTGGGCT GTCGCCCAAG
CCCGTGCCGC TGAACCTCGA CGACATCGCC GTGCTGCAGT ACACCGGCGG CACCACCGGC
CTGGCCAAGG GCGCCATGCT CACCCACGGC AACCTGGTGG CCAACATGCT GCAGGTGCTG
GCGTGCTTCT CGCAGCACGG CCCCGATGGG CAGAAGCTGC TCAAGGACGG CCAGGAGGTG
ATGATCGCGC CCCTGCCGCT TTACCACATC TATGCCTTTA CCGCGAACTG CATGTGCATG
ATGGTCACCG GCAACCACAA CGTGCTGATT ACCAACCCTC GGGATATTCC CGGCTTCATC
AAGGAGCTGG GCAAGTGGCG ATTCTCTGCG TTGCTGGGCC TCAACACCCT GTTTGTTGCG
CTGATGGACC ATCCTGGTTT CCGCCAGCTG GATTTCTCGG CGCTGAAAGT CACCAACTCC
GGCGGTACGG CGCTGGTCAA GGCAACCGCC GAGCGCTGGG AAGCCCTTAC CGGGTGCCGC
ATCGTCGAAG GCTACGGCCT GACCGAAACC TCGCCTGTGG CCAGCACCAA CCCCTATGGT
CAATTGGCGC GCCTGGGCAC AGTGGGTACT CCGGTGGCGG GTACTGCATT CAAGGTCATT
GATGATGACG GCAACGAAAT GCCGCTGGGC GAGCGCGGCG AGTTGTGCAT CAAGGGGCCA
CAGGTGATGA AGGGTTACTG GCAGCAGCCC GAGGCCACGG CCCAGGCCCT GGATGCCGAA
GGCTGGTTCA AGACCGGTGA CATCGCGGTG ATCGACCCGG ACGGCTTCAC CCGCATCGTC
GATCGCAAGA AGGACATGAT CATCGTCTCG GGTTTCAACG TGTACCCCAA CGAGATCGAG
GACGTGGTGA TGGGCCACCC CAAGGTCGCC AACTGTGCAG CCATCGGCGT GCCGGACGAC
CGCTCCGGCG AGGCGGTGAA GCTGTTCGTG GTGCCGCGCG AGGGCGGGCT GAGCGTGGAT
GAGCTGAAGG CCTACTGCAA GGCCAACTTC ACCGGCTACA AAGTACCCAA GCACATCGTG
CTGCGCGAGT CGTTGCCGAT GACGCCGGTA GGCAAGATTC TGCGACGGGA GTTGCGCGAC
ATCGCTTGA
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| Protein sequence | MQAEFWNDKR PAGVPSTIDI NAYASVVEVF ERSCKRFADR PAFSNLGVTL SYAELERHSA
AFTAWLQQHT DLKPGDRIAV QMPNVLQYPI AVFGAMRAGL IVVNTNPLYT EREMRHQFKD
SGARALVYLN MFGKRVQEVL PDTGIEYLIE AKMGDLLPTA KGWLVNTVVD KLKKMVPAYN
LPQAVPFKQV LREGRGLSPK PVPLNLDDIA VLQYTGGTTG LAKGAMLTHG NLVANMLQVL
ACFSQHGPDG QKLLKDGQEV MIAPLPLYHI YAFTANCMCM MVTGNHNVLI TNPRDIPGFI
KELGKWRFSA LLGLNTLFVA LMDHPGFRQL DFSALKVTNS GGTALVKATA ERWEALTGCR
IVEGYGLTET SPVASTNPYG QLARLGTVGT PVAGTAFKVI DDDGNEMPLG ERGELCIKGP
QVMKGYWQQP EATAQALDAE GWFKTGDIAV IDPDGFTRIV DRKKDMIIVS GFNVYPNEIE
DVVMGHPKVA NCAAIGVPDD RSGEAVKLFV VPREGGLSVD ELKAYCKANF TGYKVPKHIV
LRESLPMTPV GKILRRELRD IA
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