| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4055 |
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| Symbol | |
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| ID | 5871855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4509531 |
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| End bp | 4510838 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549183 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001670281 |
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| Protein GI | 167035050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.80988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CATTGAACAA CGGCCCGGCG CAGCGCGCGC CGTCCTACTA CACCGCCACC
CTCAACGACC ACACCGAGTA CCCCCAACTC AAGGGTACCG TACAGGTGGA TGTAGCCATC
ATCGGCGGTG GCTTCACTGG CGTAGCCACC GCGGTAGAGC TGGCCGAGCG AGGCCTGAAG
GTCGCCATCG TCGAAACCAA CCGCATCGGC TGGGGCGCCA GCGGGCGCAA TGGCGGCCAG
GTCACCGGCA GCCTGTCGGG CGACGAGGCC ATGCGCTCGC AGATGCGCAG CCACCTGGGC
AGCGAAGTCG ATGACTTCAT CTGGCGCTTG CGCTGGCGCG GGCACCAGGT GATCGAGCAA
CGCGTGGCGC GCTATGGCAT CGATTGCGAC CTCAAGCACG GCCATCTGCA TGCGGCGATG
AAGCCCTCGC ACATGAACGA GCTGCGCGCA TTCGAGGCCG AGGCCCGTCG GCGTGGCATG
GGCGAGCAGG TGCAACTGCT CGACCGCGCT GCCGTGGCCG AGCACCTGCA AAGCCCGTTG
TACCTGGGCG CGTTGAAAAA CCTGCGCAAT TTGCACCTGC ACCCGCTCAA CCTGTGCCTG
GGTGAAGCCC GAGCTGCGCA CAGCCTGGGC GCACTGATTT TCGAAAACTC CGAAGTGCTG
GACATCGTCC ATGGCCCGCG CCCGGCGGTA GTCACTGCCC ACGGCAGGGT CGAGGCACGC
CAGGTGATGC TGGCCGGCGA CGTGTATCAC AAACTGGAAA AGCGCCAGCT CAAGGGCAAG
ATCTTCCCGG CCATGGGCGG CATCGTCACC ACTGCGCCGC TGGGTGAGCT GGCCGAACAG
ATCAACCCGC AGGACTTGGC GGTGTACGAC TGCCGCTTCG TGCTCGACTA CTACCGCCTG
ACCGCCGACA AGCGCTTGTT GTTCGGCGGT GGCGCCAACT ATTCCGGCCG TGACTCACGG
GACATCGAAG GCGAACTGCG CCCGTGCATC GAGCGCACCT TCCCGGCATT GAAAGGCGTG
CCGATCGAGT TCCAGTGGAG CTGCGCCATG GGTATCGTGG TCAACCGCAT CCCGCAGTTG
GGCAAGCTGT CGGACAACGT GTGGTATTGC CAGGGTTATT CGGGGCATGG CATTGCCACC
AGCCACATCA TGGGCGAGAT CATGGCCGAG GCGTTGACCG GGACGCTGGA GAAGTTCGAC
ACCTTTGCCC AGTGCAAGCA TGTGCGGGTG CCGATGGGGG ACTTGTTGGG GAACCCGCTG
CTGGCGGCGG GGATGTGGTA CTACCAGATG CTTGAAAAAC TGCGCTGA
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| Protein sequence | MNAALNNGPA QRAPSYYTAT LNDHTEYPQL KGTVQVDVAI IGGGFTGVAT AVELAERGLK
VAIVETNRIG WGASGRNGGQ VTGSLSGDEA MRSQMRSHLG SEVDDFIWRL RWRGHQVIEQ
RVARYGIDCD LKHGHLHAAM KPSHMNELRA FEAEARRRGM GEQVQLLDRA AVAEHLQSPL
YLGALKNLRN LHLHPLNLCL GEARAAHSLG ALIFENSEVL DIVHGPRPAV VTAHGRVEAR
QVMLAGDVYH KLEKRQLKGK IFPAMGGIVT TAPLGELAEQ INPQDLAVYD CRFVLDYYRL
TADKRLLFGG GANYSGRDSR DIEGELRPCI ERTFPALKGV PIEFQWSCAM GIVVNRIPQL
GKLSDNVWYC QGYSGHGIAT SHIMGEIMAE ALTGTLEKFD TFAQCKHVRV PMGDLLGNPL
LAAGMWYYQM LEKLR
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