Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4047 |
Symbol | |
ID | 5871847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4496340 |
End bp | 4497152 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549175 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001670273 |
Protein GI | 167035042 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATT TCGAACACGA AGGATGCTCA CTGCATTACG AGGAATATGG CCAGGGCGAA CCCCTGGTGT TGCTGCACGG TCTGGGCTCA AGCTGCCAGG ACTGGGAGTT GCAGGTGCCG GCGCTCAGCC GCCACTACCG GGTAATCCTC ATGGACATCC GTGGCCACGG CCGTTCCGAC AAACCCCGCG ACGGTTACCA GATCGCCACC TTCAGTGCCG ACCTGCTGGC CTTGCTCGAA CACCTGCACA CAGGCCCCGT ACACTTCGTC GGCCTGTCCA TGGGTGGCAT GATCGGCTTC CAGTTTGCCG TCGACCACCC GCAATGGCTG CGCAGCTTGT GCATCGTCAA CAGTGCCCCC GAAGTCAAGC GCCGCACCCG CAGTGACTGG GTATGGTGGT TCAAGCGCTG GGGCCTGGCG CGTGTCCTGA GTGTCGAAAC CGTTGGCAAG GGCCTGGCCG AGCGGCTGTT CCCCAAGCCC CGACAAGCAA ACCTGCGGCA GACGATGGCC CAGCGCTGGG CACGCAATGA CAAACGCGCC TACCTCAAGA GTTTCGACGC TATCGTCGAC TGGGGCGTGC AGGAACGCAT CGGGCAGATC CACTGTCCTA CCCTGGTCAT CGCCGCCGAC CACGATTACA CCCCGATACA ACTGAAAGAG CGCTACGTCG CCCTTATGCC CAATGCCAGG CTGGTCGTCG TCGACGATTC CCGGCACGCT ACCCCCCTCG ATCAACCCGA GGTCTTCAAC CAGACCCTGC TGCAGTTCCT CGCAGCCGCC TCCACCTCTC AAGGATCTTT GAGCCCATGC TGA
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Protein sequence | MAYFEHEGCS LHYEEYGQGE PLVLLHGLGS SCQDWELQVP ALSRHYRVIL MDIRGHGRSD KPRDGYQIAT FSADLLALLE HLHTGPVHFV GLSMGGMIGF QFAVDHPQWL RSLCIVNSAP EVKRRTRSDW VWWFKRWGLA RVLSVETVGK GLAERLFPKP RQANLRQTMA QRWARNDKRA YLKSFDAIVD WGVQERIGQI HCPTLVIAAD HDYTPIQLKE RYVALMPNAR LVVVDDSRHA TPLDQPEVFN QTLLQFLAAA STSQGSLSPC
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