Gene PputGB1_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4047 
Symbol 
ID5871847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4496340 
End bp4497152 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID641549175 
Productalpha/beta hydrolase fold 
Protein accessionYP_001670273 
Protein GI167035042 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATT TCGAACACGA AGGATGCTCA CTGCATTACG AGGAATATGG CCAGGGCGAA 
CCCCTGGTGT TGCTGCACGG TCTGGGCTCA AGCTGCCAGG ACTGGGAGTT GCAGGTGCCG
GCGCTCAGCC GCCACTACCG GGTAATCCTC ATGGACATCC GTGGCCACGG CCGTTCCGAC
AAACCCCGCG ACGGTTACCA GATCGCCACC TTCAGTGCCG ACCTGCTGGC CTTGCTCGAA
CACCTGCACA CAGGCCCCGT ACACTTCGTC GGCCTGTCCA TGGGTGGCAT GATCGGCTTC
CAGTTTGCCG TCGACCACCC GCAATGGCTG CGCAGCTTGT GCATCGTCAA CAGTGCCCCC
GAAGTCAAGC GCCGCACCCG CAGTGACTGG GTATGGTGGT TCAAGCGCTG GGGCCTGGCG
CGTGTCCTGA GTGTCGAAAC CGTTGGCAAG GGCCTGGCCG AGCGGCTGTT CCCCAAGCCC
CGACAAGCAA ACCTGCGGCA GACGATGGCC CAGCGCTGGG CACGCAATGA CAAACGCGCC
TACCTCAAGA GTTTCGACGC TATCGTCGAC TGGGGCGTGC AGGAACGCAT CGGGCAGATC
CACTGTCCTA CCCTGGTCAT CGCCGCCGAC CACGATTACA CCCCGATACA ACTGAAAGAG
CGCTACGTCG CCCTTATGCC CAATGCCAGG CTGGTCGTCG TCGACGATTC CCGGCACGCT
ACCCCCCTCG ATCAACCCGA GGTCTTCAAC CAGACCCTGC TGCAGTTCCT CGCAGCCGCC
TCCACCTCTC AAGGATCTTT GAGCCCATGC TGA
 
Protein sequence
MAYFEHEGCS LHYEEYGQGE PLVLLHGLGS SCQDWELQVP ALSRHYRVIL MDIRGHGRSD 
KPRDGYQIAT FSADLLALLE HLHTGPVHFV GLSMGGMIGF QFAVDHPQWL RSLCIVNSAP
EVKRRTRSDW VWWFKRWGLA RVLSVETVGK GLAERLFPKP RQANLRQTMA QRWARNDKRA
YLKSFDAIVD WGVQERIGQI HCPTLVIAAD HDYTPIQLKE RYVALMPNAR LVVVDDSRHA
TPLDQPEVFN QTLLQFLAAA STSQGSLSPC