| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4040 |
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| Symbol | |
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| ID | 5871840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4490537 |
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| End bp | 4491838 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549168 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001670266 |
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| Protein GI | 167035035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.435136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAC AAAGAATCTG GCGTGACTCC CTCGACCTGT GGGGCACCCT CGACCAACAT
CCCATGTTGC ACGCTGCCAT CGGCTTGGCG GTGTTGCTGC TGATTTCTCT GGTGGTCGGC
CGCCTGGCGC GCTTCCTCAT GCTGCACGGC GCGCGCCTGC TGGCCCGCCA GCCAGCGCTG
AAGTGGCTGG ACGACCTGCG CCACAACAAG GTGTTCCACC GCCTGGCGCA AACCACCCCG
TCGCTGGTAC TGCAGTTCGG CCTGAAGCTG GTGCCGGAGC TGTCAGATAC CGCCCAGCAC
TTCCTCGGCA ATGTCGCCCT GGCGTTTACC CTGCTGTTCA TGACCATGGC GCTGTCGTGC
CTGCTGGATG CCCTGCTCGA CATCTATGCT CGCACCGAAC ACGCCCGCAC CCGCTCGATC
AAGGGCTACG TGCAACTGGC CAAGATGATG TTGTGGATCT TCGCCTCGAT CGTCATCGTC
GCCACCCTGA TCGACCGTTC GCCGTTGCTG CTGCTGTCGG GTCTGGGTGC CATGTCGGCG
GTGCTGCTGT TGGTGTACAA GGACACCCTG CTGTCGTTCG TCGCCAGCGT GCAGTTGACC
AGCAACGACA TGCTGCATGT GGGTGACTGG ATCGAAATGC CGCAGGTGGG TGCCGATGGT
GACGTGGTGG ATATCACCCT GCACACGGTG AAGGTGCAGA ACTTCGACAA GACCATCGTT
TCCATCCCCA CCTGGCGCCT GATGAGCGAG TCGTTCCGCA ACTATCGCGG CATGCAGCAA
TCCGGGGGCC GGCGAATCAA ACGCAGCCTG TTCATCGATG CCGCCGGCGT GCGCTTCCTT
ACCCGCGAAG AGGAACAGCG CCTGAGCCAG GTTCAGTTGC TTGGCGATTA CCTGGCAGGC
AAGCGCCAGG AGCTGCAGAA CTGGAACGAA GCCCTGGGGC CTGTCGCCGA GCTGTCGGCC
AATCGCCGCA AGCTGACCAA CATCGGCACC TTCCGCGCGT TTGCCCTGGC TTACCTGAAG
AACCACCCCA ACGTTCACCC GAACATGACC TGCATGGTGC GGCAGATGCA GACCACCGCC
GAAGGCGTGC CGCTGGAAAT CTACTGCTTC ACCACCACCA CGGCATGGGC TGAGTATGAG
CGGATCCAGG GGGATATCTT CGACTACCTG CTGGCGGTGT TGCCAGAGTT TGGCTTGAGC
CTGTATCAGC AGCCGAGCGG CAATGACATG CGGGTGGGGT TGAGCGGGCG TTTGGCGCAA
GAGCCTGTCC AGCATCGCCT GGAACAGCTG AGCGAAGCTT GA
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| Protein sequence | MDIQRIWRDS LDLWGTLDQH PMLHAAIGLA VLLLISLVVG RLARFLMLHG ARLLARQPAL
KWLDDLRHNK VFHRLAQTTP SLVLQFGLKL VPELSDTAQH FLGNVALAFT LLFMTMALSC
LLDALLDIYA RTEHARTRSI KGYVQLAKMM LWIFASIVIV ATLIDRSPLL LLSGLGAMSA
VLLLVYKDTL LSFVASVQLT SNDMLHVGDW IEMPQVGADG DVVDITLHTV KVQNFDKTIV
SIPTWRLMSE SFRNYRGMQQ SGGRRIKRSL FIDAAGVRFL TREEEQRLSQ VQLLGDYLAG
KRQELQNWNE ALGPVAELSA NRRKLTNIGT FRAFALAYLK NHPNVHPNMT CMVRQMQTTA
EGVPLEIYCF TTTTAWAEYE RIQGDIFDYL LAVLPEFGLS LYQQPSGNDM RVGLSGRLAQ
EPVQHRLEQL SEA
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