| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4030 |
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| Symbol | |
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| ID | 5871830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4482544 |
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| End bp | 4483923 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549158 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001670256 |
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| Protein GI | 167035025 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.110038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.104242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGG ACATCATTGT TGTAATGATC TACACCGCCG GCATGCTCGG GCTGGGCTGG
TACGGCATGC GACGCGCGAA AACCCATGAA GACTACCTGG TAGCCGGGCG CAACCTCGGC
CCGGTGCTGT ACATGGGTAC CATGGCCACC ACCGTGCTCG GTGGCGCTTC TACCGTTGGC
ACTGTGCGCC TGGGCTACGT TCACGGCATT TCCGGTTTCT GGCTGTGCGC AGCCCTGGGC
CTGGGCATCA TCGCCATCAA CCTGTTCCTG GCCAAACCGT TGCTGCGCCT GCGCATCTTC
ACCGTGACCC AGGTGCTTGA GCAACGCTAC AACCCTACCG CACGTCAGGC CAGCGCCGTG
ATCATGCTGG CTTACGCGCT GATGATCGGC GTCACCTCGA CCCTGGCCAT GGCCACCGTA
TTGCAAGTGC TGCTGGACTT GCCGTTCTGG GCTTCGCTGC TGCTCGGCGG CGGTGTGGTG
GTGCTGTATT CGACCATTGG CGGCATGTGG TCGCTGACCC TGACCGACAT CGTCCAGTTC
GTGATCAAGA CCGTCGGCCT GATGTTCATC CTGCTGCCGG TGTGCCTGTA CAAGGCCGGT
GGTTGGGACA CCCTGGTGGC CAAATTGCCA GCGGCCAGCT TCCAGCTGAC CACCATTGGC
TGGGACACCA TCGTTACCTA CTTCCTGATC TACTTCTTCG GCATTCTCAT CGGCCAGGAC
ATCTGGCAGC GTGTATTCAC TGCTCGCGAT GAAAAGGTCT GCCAGCGTGC CGGCACCGTC
GCCGGTGTGT ACTGTGTGGT GTACGGCCTG GCTTGCGCTG CCATCGGCAT GGCGGCACAT
GTGCTGATGC CCGACCTGGC CAACCCGAAC AACGCCTTTG CCGAGATGAT CAAGAGCACC
CTGCCCGATG GCATCCGTGG CCTGCTGATG GCCGCAGCAC TGGCAGCCAT GATGTCCACC
GCCAGTGCCG GCCTGCTGGC CGCTTCGACC ACTGTGACCG AAGACCTGCT GCCCAAGCTG
CGTGGCGGCA AGCAATCGAG CCTGGGGCTC AGCCGCCTGT TCACCCTGCT CACCGGCCTG
GTGGTGCTGG GCATCGCGCT GATGGTGAAC GATGTGATCA ACGCCCTGAC CCTGGCCTAC
AACCTGCTGG TCGGCGGCAT GCTGATCCCG CTGATCGGGG CAATCTTCTG GAAACGTGCG
ACCACTGCCG GTGCGATTGC CAGCATGTCG CTGGGCTTTG CCACTGCGCT GCTGTTCATG
TTCAAGGACG GGCTGGAGGC CAATACACCG ATCTACTACA GCCTGGCGAT TGGCTTGGTG
AGTTTTGTGG TGGTTAGCCT GATGTCGCGC AAACCAGTCG GTGCAGTGAA TCTGGCCTGA
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| Protein sequence | MALDIIVVMI YTAGMLGLGW YGMRRAKTHE DYLVAGRNLG PVLYMGTMAT TVLGGASTVG
TVRLGYVHGI SGFWLCAALG LGIIAINLFL AKPLLRLRIF TVTQVLEQRY NPTARQASAV
IMLAYALMIG VTSTLAMATV LQVLLDLPFW ASLLLGGGVV VLYSTIGGMW SLTLTDIVQF
VIKTVGLMFI LLPVCLYKAG GWDTLVAKLP AASFQLTTIG WDTIVTYFLI YFFGILIGQD
IWQRVFTARD EKVCQRAGTV AGVYCVVYGL ACAAIGMAAH VLMPDLANPN NAFAEMIKST
LPDGIRGLLM AAALAAMMST ASAGLLAAST TVTEDLLPKL RGGKQSSLGL SRLFTLLTGL
VVLGIALMVN DVINALTLAY NLLVGGMLIP LIGAIFWKRA TTAGAIASMS LGFATALLFM
FKDGLEANTP IYYSLAIGLV SFVVVSLMSR KPVGAVNLA
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