Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3999 |
Symbol | |
ID | 5871799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4448829 |
End bp | 4451849 |
Gene Length | 3021 bp |
Protein Length | 1006 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549127 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_001670225 |
Protein GI | 167034994 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00316797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGCCC AGCTGTCGAC CGTTGCACCG AGCGCCAATT ACCCCGAATT CCTCGAAGCC CTGCGCAACA GCGGCTTCCG TGGCCAGATC AGTGCCGACT ACGCTACCCG CACCGTGCTG GCCACCGACA ACTCGATCTA CCAGCGCTTG CCGCAAGCGG CGGTGTTTCC GCTGGATGCC GACGATGTGG CGCGGGTCGC CACGCTGATG GGCGAGCCGC GCTTCCAGCA GGTCAAGCTT ACCCCGCGCG GCGGTGGCAC TGGCACCAAC GGGCAGTCGC TGACCGACGG TATCGTCGTC GACTTGTCGC GGCACATGAA CAAGATCCTC GAAATCAACG TCGAGGAGCG TTGGGTACGG GTGCAGGCCG GTACGGTCAA GGACCAGCTC AATGCTGCGC TCAAGCCGCA CGGGCTGTTC TTCGCCCCTG AGCTGTCCAC CTCCAACCGC GCCACGGTTG GCGGCATGAT CAACACCGAC GCCAGTGGCC AGGGCAGTTG CACCTACGGC AAAACCCGCG ATCACGTACT GGAGCTGCAC AGCGTGCTGC TCGGTGGTGA GCGCCTGCAC AGCCTGCCGA TCGGCGATGC CGCGCTGGAG CAAGCCTGTG CCGCGCCCGG CCGGGTCGGC GAGGTGTACC GCATGGCCCG GGACATTCAG CAAACCCAGG GCGAATTGAT CGAAACCACC TTCCCCAAGC TCAACCGTTG CCTGACCGGC TACGACCTCG CGCACCTGCG CGACGAGCAG GGGCGCTTCA ACCTCAACAG CGTGTTGTGT GGCGCCGAGG GCTCGCTGGG CTACGTGGTC GAAGCCAAGC TCAACGTTTT GCCGATCCCC AAGTACGCGG TGCTGGTCAA CGTACGCTAC ACCAGCTTCA TGGACGCGCT GCGCGACGCT AATGCGCTGA TGGCGCACAA GCCGCTGTCG ATCGAGACGG TTGATTCCAA GGTGCTGATG CTGGCGATGA AAGACATCGT CTGGCACAGC GTTGCCGAGT ACTTCCCGGC CGACCCCGAG CGCCCGACCC TGGGTATCAA CCTGGTGGAG TTCTGTGGCG ACGAGCCGGC TGAGGTCAAC GCCAAGGTGC AGGCGTTCAT CCAGCACCTG CAAAGCGATA CCAGCGTCGA GCGCCTGGGC CACACCCTTG CCGAGGGGGC GGAGGCAGTC ACTCGCGTGT ACACCATGCG TAAACGTTCG GTAGGGCTGC TGGGCAACGT CGAAGGCGAG GTACGGCCGC AGCCGTTCGT TGAAGACACC GCCGTACCGC CGGAGCAGTT GGCCGACTAC ATCGCCGATT TCCGCGCGCT GCTCGATGGC TACGGCCTGG CCTACGGCAT GTTCGGCCAT GTCGATGCCG GCGTGCTGCA CGTGCGCCCG GCACTGGACA TGAAAGACCC GGCGCAGGCC GCATTGGTCA AGCCGATTTC CGACGCCGTT GCCGCTCTGA CCAAAAGCTA CGGCGGCCTG CTGTGGGGCG AGCACGGCAA GGGCCTGCGC TCGGAATACG TGCCGGAGTA CTTCGGCGAG CTGTACCCGG CGCTGCAGCG TCTGAAGGGT GCGTTCGACC CGCACAACCA GCTCAATCCC GGCAAGATCT GCACCCCACT GGGCAGCTCA GAGGGCCTGA CTCCGGTCGA TGGCGTGACC CTGCGCGGCG ACCTCGACCG TACCATCGAC GAGCGCGTGT GGCAGGACTT CCCCAGTGCC GTGCACTGCA ACGGCAATGG CGCCTGCTAC AACTACGACC CCAACGACGC CATGTGCCCG TCGTGGAAGG CTACCCGCGA GCGTCAGCAT TCGCCCAAGG GTCGCGCCTC GCTGATGCGC GAGTGGCTGC GCCTGCAGGG CGAGGCGAAC ATCGACGTGC TGGCGGCGGC GCGTAGCAAG GTGTCGTGGC TCAAGGGCCT GCCGGTGCGC CTGCGCAATA ACCGCGCACG CAGCCAGGGC CAGGAAGACT TTTCCCATGA GGTATACGAC GCCATGGCCG GCTGCCTGGC GTGCAAGTCG TGCGCCGGGC AGTGCCCGAT CAAGGTCAAC GTGCCGGACT TCCGCTCGCG CTTCCTCGAG CTGTATCACG GTCGCTACCA GCGCCCGCTG CGTGACTACC TGATTGGCTC GCTGGAGTTC ACCATCCCGT ACCTGGCCCA TGCGCCGGGG CTGTACAACG CCGTGATGGG CTCGAAGTGG GTGAGCAAGC TGCTGGCCGA CAAGGTGGGG ATGGTCGACA GCCCGCTGAT CAGCCGCTTC AACTTCCAGG CCACCCTGAC CCGCTGCCGC GTTGGCGTGG CCACGGTGCC GACACTGCGC GAGCTGACCC CGGCCCAGCG CGAGCGCAGC ATCGTGCTGG TGCAGGATGC CTTCACTCGC TACTTTGAAA CGCCGCTGCT GTCGGCCTTC ATCGACCTGG CCCATCGCCT GGGCCACCGG GTGTTCCTGG CGCCTTACAG CGCCAACGGC AAGCCGCTGC ACGTACAGGG CTTCCTGGGT GCGTTTGCCA AGGCGGCGCT CCGCAACGCC ACCCAGCTCA AGGCCCTGGC CGAATGCGGC GTGCCGCTGG TAGGGCTGGA CCCGGCGATG ACCCTGGTGT ATCGCCAGGA GTACCAGAAG GTGCCGGGCC TGGAAGGCTG CCCGCAGGTG CTGTTGCCGC AGGAGTGGCT GATGAATGTG CTGCCTGAGC AGGCGCCGAC CGCACCGGGT AACTTCCGCT TGATGGCACA CTGCACCGAG AAGACCAACG TGCCGGCCAG TACCAAGCAG TGGGAGCAGG TGTTTGCCCG TTTGGGGCTG AAGCTGGTGA CCGAGGCCAC GGGGTGCTGC GGCATGTCCG GCACTTATGG GCACGAAGCG CGCAATCAGG AAACCTCGCG GACCATCTTC GAGCAGAGCT GGGCGACCAA GCTGGACAAG GAAGGAGAGC CGCTGGCGAC CGGTTATTCG TGCCGTAGCC AGGTCAAGCG CATGACCGAA CGCAAGATGC GCCACCCGCT GGAAGTGGTG TTGCAGTACG CCCAGCGTTA A
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Protein sequence | MIAQLSTVAP SANYPEFLEA LRNSGFRGQI SADYATRTVL ATDNSIYQRL PQAAVFPLDA DDVARVATLM GEPRFQQVKL TPRGGGTGTN GQSLTDGIVV DLSRHMNKIL EINVEERWVR VQAGTVKDQL NAALKPHGLF FAPELSTSNR ATVGGMINTD ASGQGSCTYG KTRDHVLELH SVLLGGERLH SLPIGDAALE QACAAPGRVG EVYRMARDIQ QTQGELIETT FPKLNRCLTG YDLAHLRDEQ GRFNLNSVLC GAEGSLGYVV EAKLNVLPIP KYAVLVNVRY TSFMDALRDA NALMAHKPLS IETVDSKVLM LAMKDIVWHS VAEYFPADPE RPTLGINLVE FCGDEPAEVN AKVQAFIQHL QSDTSVERLG HTLAEGAEAV TRVYTMRKRS VGLLGNVEGE VRPQPFVEDT AVPPEQLADY IADFRALLDG YGLAYGMFGH VDAGVLHVRP ALDMKDPAQA ALVKPISDAV AALTKSYGGL LWGEHGKGLR SEYVPEYFGE LYPALQRLKG AFDPHNQLNP GKICTPLGSS EGLTPVDGVT LRGDLDRTID ERVWQDFPSA VHCNGNGACY NYDPNDAMCP SWKATRERQH SPKGRASLMR EWLRLQGEAN IDVLAAARSK VSWLKGLPVR LRNNRARSQG QEDFSHEVYD AMAGCLACKS CAGQCPIKVN VPDFRSRFLE LYHGRYQRPL RDYLIGSLEF TIPYLAHAPG LYNAVMGSKW VSKLLADKVG MVDSPLISRF NFQATLTRCR VGVATVPTLR ELTPAQRERS IVLVQDAFTR YFETPLLSAF IDLAHRLGHR VFLAPYSANG KPLHVQGFLG AFAKAALRNA TQLKALAECG VPLVGLDPAM TLVYRQEYQK VPGLEGCPQV LLPQEWLMNV LPEQAPTAPG NFRLMAHCTE KTNVPASTKQ WEQVFARLGL KLVTEATGCC GMSGTYGHEA RNQETSRTIF EQSWATKLDK EGEPLATGYS CRSQVKRMTE RKMRHPLEVV LQYAQR
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