| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3994 |
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| Symbol | |
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| ID | 5871794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4443194 |
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| End bp | 4444753 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549122 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001670220 |
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| Protein GI | 167034989 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.295924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0800973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA AAGTGCATTG CCAGAACCGC ATTGGCATCC TGCGCGACAT CCTCAACCTG
CTGGTCGAGT ACGGCATCAA CGTACTGCGC GGCGAGGTGG GCGGTGACCA TGGCAACGCC
ATCTACCTGC ACTGCCCGAA CCTGATCAAT CTGCAGTTCC AAGCCTTGCG ACCGAAGTTC
GAGGCCATAG CCGGGGTATT TGGCGTGAAG CGCGTGGGCC TGATGCCCAG TGAGCGCCGG
CACATGGAGC TGAATGCGCT GCTCGGGGCG CTGGATTTCC CGGTGCTATC GATCGACATG
GGAGGCAGCA TCGTTGCCGC CAACCGTTCC GCCGCACAGT TGCTAGGGGT GCGGGTAGAC
GAAGTGCCGG GCATGCCGCT GGCGCGCTAT GTAGAAGACT TCGACCTGCC GGAGCTGGTA
AGGGCCAACA AGTCACGCAT CAATGGCCTG CGTATCAAGG TCAAGGGTGA TGTGTTCCTG
GCCGATATCG CACCGCTGCA GTCCGAGCAC GACGAGAGCG AGGCGCTGGC TGGCGCGGTA
CTTACCCTGC ATCGGGCTGA TCGCATCGGC GAGCGTATCT ACAATGTGCG CAAGCAGGAG
CTACGCGGTT TCGACAGCAT CTTCCAGAGC TCACGGGTGA TGGCTGCGGT GGTGCGTGAA
GCGCGGCGCA TGGCGCCGCT GGATGCGCCG TTGCTGATCG AGGGCGAAAC CGGTACTGGC
AAGGAGCTGC TGGCGCGCGC CTGCCATCTG GCCAGCCCGC GTGGGCAGTC GCCGCTGATG
GCGCTCAACT GCGCTGGGTT GCCCGAGTCG ATGGCCGAGA CCGAGCTGTT CGGTTACGGC
CCTGGAGCAT TCGAAGGAGC GCGGGCCGAA GGCAAGCTTG GGCTGTTGGA GCTGACCGCA
GGTGGCACGC TGTTCCTTGA TGGGGTAGGG GAGATGAGCC CGCGCTTGCA GGTGAAGCTG
CTGCGCTTTC TGCAGGACGG CTGTTTTCGC CGGGTCGGCA GCGATGAAGA GGTGTACCTG
GATGTGCGGG TGATTTGCGC GACCCAAGTG GATTTGTCCG AACTGTGTGC CCGTGGCGAG
TTTCGCCAGG ACCTTTATCA CCGCCTTAAC GTATTGTCGC TGCACATTCC GCCTTTGCGT
GAATGCATGG ATGGGCTGGA GGGGCTGGTG CAGCACTTTC TCGATCAGGC CAGCCGACAG
ATCGGCTGCG CCATGCCGCG CCTGGCGCCG GCGGCAATGG AAAAACTTGG GCAATACCAT
TGGCCGGGCA ATGTAAGGCA ATTGGAAAAC GTATTGTTCC AAGCGGTTTC TTTATGCGAA
GGCGGCGTGG TCAAAAGCGA GCATATACGC CTGCCGGATT ATGGCGCGCG GCAGCCGTTG
GGCGAGTTTT CATTGGAAGG GGATCTTTCG CAGATTGTCG GGCGCTTTGA GAAAGCGGTA
CTGGAAAGTT TGATGGGGGA ATTTTCGAGT AGTCGGGCGT TAGGGAAAAG ATTGGGTGTT
TCGCACACGA CAATTGCCAA CAAGTTGAGA GATTACGCGC TTAACAAGTC GACGGATTAG
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| Protein sequence | MRIKVHCQNR IGILRDILNL LVEYGINVLR GEVGGDHGNA IYLHCPNLIN LQFQALRPKF
EAIAGVFGVK RVGLMPSERR HMELNALLGA LDFPVLSIDM GGSIVAANRS AAQLLGVRVD
EVPGMPLARY VEDFDLPELV RANKSRINGL RIKVKGDVFL ADIAPLQSEH DESEALAGAV
LTLHRADRIG ERIYNVRKQE LRGFDSIFQS SRVMAAVVRE ARRMAPLDAP LLIEGETGTG
KELLARACHL ASPRGQSPLM ALNCAGLPES MAETELFGYG PGAFEGARAE GKLGLLELTA
GGTLFLDGVG EMSPRLQVKL LRFLQDGCFR RVGSDEEVYL DVRVICATQV DLSELCARGE
FRQDLYHRLN VLSLHIPPLR ECMDGLEGLV QHFLDQASRQ IGCAMPRLAP AAMEKLGQYH
WPGNVRQLEN VLFQAVSLCE GGVVKSEHIR LPDYGARQPL GEFSLEGDLS QIVGRFEKAV
LESLMGEFSS SRALGKRLGV SHTTIANKLR DYALNKSTD
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