| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3991 |
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| Symbol | |
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| ID | 5871791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4439126 |
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| End bp | 4439911 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641549119 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001670217 |
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| Protein GI | 167034986 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.288365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TCGCACTGCT TGGCGCCCTG GCGCTGTCTG TGTTTTCCCT GGTGTCGCAG
GCCGATGAAA AACCGCTGAA AATCGGCATC GAAGCCGCCT ACCCACCCTT CGCCTTCAAG
CAACCTGACG GCAGCATCGC AGGTTTTGAC TACGACATCG GCAACGCCCT GTGCGAAGAG
ATGAAAGCCA AGTGCACCTG GGTCGAGCAG GAGTTCGACG GCCTGATCCC GGCGCTGAAA
GTGCGCAAGA TCGACGCCAT CCTGTCGTCC ATGTCGATCA CCGATGACCG CAAGAAATCG
GTTGACTTCA CCAAGCGCTA CTACCTGACC CCGGCGCGCC TGGTCATGAA GGACGGCACC
ACTGTCAGCG ACAGCCTGGA TGAACTCAAA GGCAAGAAGA TTGGCGTGCA ACGCGGCTCG
ATCCACGATC GCTTCGCCAA GGAAGTGCTG GGCGCCAAAG GTGCCACCGT GGTGCCTTAC
GGCACCCAGA ACGAAATCTA CCTCGATGTG GCGGCTGGTC GTCTCGACGG TACCGTGGCC
GATGCCACCC TGCTGGAAGA CGGTTTCCTC AAGACCGACG CCGGCAAGGG CTTCGCCTTC
GTAGGCCCGG CCTTCACCGA CGCCAAGTAC TTTGGTGACG GCATCGGCAT CGCCGTGCGC
AAGGGCGACA AGGCCAACGT CGATCGTATC AACGCGGCCA TCGACGCCAT CCGTGCAAAC
GGCAAGTACA AAGAAATCGA GAAGAAGTAC TTCAACTTCG ACATCTACGG TCCAGACTCG
AACTAA
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| Protein sequence | MKKLALLGAL ALSVFSLVSQ ADEKPLKIGI EAAYPPFAFK QPDGSIAGFD YDIGNALCEE
MKAKCTWVEQ EFDGLIPALK VRKIDAILSS MSITDDRKKS VDFTKRYYLT PARLVMKDGT
TVSDSLDELK GKKIGVQRGS IHDRFAKEVL GAKGATVVPY GTQNEIYLDV AAGRLDGTVA
DATLLEDGFL KTDAGKGFAF VGPAFTDAKY FGDGIGIAVR KGDKANVDRI NAAIDAIRAN
GKYKEIEKKY FNFDIYGPDS N
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