| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3989 |
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| Symbol | |
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| ID | 5871789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4437653 |
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| End bp | 4438351 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549117 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001670215 |
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| Protein GI | 167034984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.60113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTG ACTACAACGT GGTCTGGGAG GCATTGCCGC TGTATTTCGG CGGGCTGCTG
ACCACCCTCA AGCTGCTGGC GATCTCGCTG TTCTTCGGCC TGCTGGCGGC TATTCCACTG
GGCCTGATGC GGGTATCCAA ACAGCCTGTG GTCAACCTGG CTGCATGGCT GTACACCTAC
GTGATCCGCG GCACGCCGAT GCTGGTGCAG TTGTTCCTGA TCTATTATGG CCTGGCTCAG
TTCGAGGCCG TGCGCGAAAG TATTTTCTGG CCGTTGCTGT CCAGTGCCAC CTTCTGCGCC
TGCCTGGCGT TCGGCATCAA TACCAGTGCC TACACCGCCG AAATCATCGC CGGTAGCCTC
AAGGCCACGC CGCACGGCGA GATCGAGGCG GCCAAGGCCA TGGGCATGTC GCGCATGAAG
ATGTACCGCC GCATCCTGCT GCCGTCGGCC CTGCGCCGGG CGCTGCCGCA GTACAGCAAC
GAAGTGATCA TGATGCTGCA GACCACCAGC CTGGCGTCGA TCGTCACCCT GATCGACATC
ACCGGTGCCG CACGCACGGT CAATGCCCAG TACTACCTGC CTTTCGAGGC CTATATCACG
GCGGGCGTGT TCTACCTGTG CCTGACCTTC ATCCTGGTGC GCCTGTTCAA GATGGCCGAA
CGCCGCTGGC TCGGCTACCT GGCGCCGCGC AAGCACTGA
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| Protein sequence | MIFDYNVVWE ALPLYFGGLL TTLKLLAISL FFGLLAAIPL GLMRVSKQPV VNLAAWLYTY
VIRGTPMLVQ LFLIYYGLAQ FEAVRESIFW PLLSSATFCA CLAFGINTSA YTAEIIAGSL
KATPHGEIEA AKAMGMSRMK MYRRILLPSA LRRALPQYSN EVIMMLQTTS LASIVTLIDI
TGAARTVNAQ YYLPFEAYIT AGVFYLCLTF ILVRLFKMAE RRWLGYLAPR KH
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