| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3986 |
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| Symbol | argD |
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| ID | 5871786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4434259 |
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| End bp | 4435479 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549114 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001670212 |
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| Protein GI | 167034981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTG AGCAAGCCCC GGTGCAACGT GCCGATTTCG ACCAGGTCAT GGTTCCCAAT
TATTCTCCGG CGGCCTTCAT TCCTGTGCGA GGCGAGGGTT CCCGCGTCTG GGACCAGTCG
GGTCGCGAGT TGATCGACTT TGCCGGTGGT ATCGCGGTAA ACGCCCTGGG TCACTGCCAT
CCGGCACTGG TCAAGGCCCT GACCGAACAG GCCAACACCC TCTGGCATGT ATCCAACGTG
TTCACCAACG AGCCGGCCCT TCGCCTGGCT CACAAGCTGG TGGACGCTAC CTTTGCCGAC
CGCGCGTTCT TCTGCAACTC TGGCGCCGAG TCCAACGAGG CTGCTTTCAA GCTGGCCCGT
CGCGTTGCCC ATGATCGCTT CGGCCCTGAA AAGCACGAAA TCATCGCCAC CGTGAACAGC
TTCCACGGTC GCACCCTGTT CACCGTCAGC GTCGGTGGCC AACCGAAGTA CTCCGACGGC
TTCGGCCCGA AGATCACCGG TATCAGCCAC GTGCCCTACA ACGACCTGGA AGCACTGAAG
GCGCAGATTT CCGATAAGAC CTGCGCCGTG GTGATCGAGC CGATCCAGGG CGAAAGTGGC
GTGGTGCCGG CCGACAAGGC CTACCTGGAA GGCGCGCGCA AGCTGTGTGA CGAGCACAAC
GCCCTGCTGA TCTTCGACGA AGTGCAGACT GGCGTGGGCC GCACCGGCTC GCTGTATGCC
TACCAGCATT ACGGCGTGAC CCCGGACATC CTGACCAGCG CCAAGAGCCT GGGCGGCGGC
TTCCCGATCG GTGCCATGCT GACCACCACC GAGCTGGCCA AGCACCTGGC CGTTGGCACC
CACGGCACCA CCTATGGCGG CAACCCACTG GGCTGCGCCG TTGCCTGTGC GGTGCTGGAC
GTTATCAACA CCCCGCAAAC CCTGGCCGGC ATCAAGGCCA AGCACGAACG CTTCAAAACC
CGCCTGGAGC AGATCGGCCA GAAGTACAAC CTGTTCACCC AGGTGCGTGG TGTCGGCCTG
CTGCTGGGTT GCGTGCTGAC CGAAGCCTGG CAAGGCAAGG CCAAGGACGT GCTTAACGCG
GCCGAGAAAG AAGGCGTAAT GGTGCTGCAG GCCGGCCCGG ACGTGGTCCG CTTCGCGCCA
AGCCTGGTGG TTGAAGACGC CGACATCGAT GCAGGCCTGG ACCGCTTCGA GCGCGCCGTG
GCCACACTGA CCCAAGGCTG A
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| Protein sequence | MSVEQAPVQR ADFDQVMVPN YSPAAFIPVR GEGSRVWDQS GRELIDFAGG IAVNALGHCH
PALVKALTEQ ANTLWHVSNV FTNEPALRLA HKLVDATFAD RAFFCNSGAE SNEAAFKLAR
RVAHDRFGPE KHEIIATVNS FHGRTLFTVS VGGQPKYSDG FGPKITGISH VPYNDLEALK
AQISDKTCAV VIEPIQGESG VVPADKAYLE GARKLCDEHN ALLIFDEVQT GVGRTGSLYA
YQHYGVTPDI LTSAKSLGGG FPIGAMLTTT ELAKHLAVGT HGTTYGGNPL GCAVACAVLD
VINTPQTLAG IKAKHERFKT RLEQIGQKYN LFTQVRGVGL LLGCVLTEAW QGKAKDVLNA
AEKEGVMVLQ AGPDVVRFAP SLVVEDADID AGLDRFERAV ATLTQG
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