Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3972 |
Symbol | |
ID | 5871766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4417055 |
End bp | 4417381 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549094 |
Product | branched-chain amino acid transport |
Protein accession | YP_001670198 |
Protein GI | 167034967 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.573883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA TGACTCAATG GATAACCTTC GCCCTGATCG GCCTGGGCAC GTTCGCCATC CGCCTGTCGT TCATCGAACT GCACACGGTG CTGCGCATTC CACCGCTGTT TCGCCGGGCA CTGGCGTATG TGCCGGCCAG CGTACTGGCA GCACTGGTAC TACCGGCGGT GGTGTTCCCG GACCGTCATG CCGGGTTCGA CTGGATGAAC CCGCAGATAC CGGCGGCGGT ACTGGCGGCA CTGGTGGCGT GGCGCACGCG TAGTACGTTG CTGACACTGG TAGTGGGCAT GGGCGTGTTA TGGGCGCTCA AGCACTGGGG GCTATAG
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Protein sequence | MSEMTQWITF ALIGLGTFAI RLSFIELHTV LRIPPLFRRA LAYVPASVLA ALVLPAVVFP DRHAGFDWMN PQIPAAVLAA LVAWRTRSTL LTLVVGMGVL WALKHWGL
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