Gene PputGB1_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3972 
Symbol 
ID5871766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4417055 
End bp4417381 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID641549094 
Productbranched-chain amino acid transport 
Protein accessionYP_001670198 
Protein GI167034967 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.573883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA TGACTCAATG GATAACCTTC GCCCTGATCG GCCTGGGCAC GTTCGCCATC 
CGCCTGTCGT TCATCGAACT GCACACGGTG CTGCGCATTC CACCGCTGTT TCGCCGGGCA
CTGGCGTATG TGCCGGCCAG CGTACTGGCA GCACTGGTAC TACCGGCGGT GGTGTTCCCG
GACCGTCATG CCGGGTTCGA CTGGATGAAC CCGCAGATAC CGGCGGCGGT ACTGGCGGCA
CTGGTGGCGT GGCGCACGCG TAGTACGTTG CTGACACTGG TAGTGGGCAT GGGCGTGTTA
TGGGCGCTCA AGCACTGGGG GCTATAG
 
Protein sequence
MSEMTQWITF ALIGLGTFAI RLSFIELHTV LRIPPLFRRA LAYVPASVLA ALVLPAVVFP 
DRHAGFDWMN PQIPAAVLAA LVAWRTRSTL LTLVVGMGVL WALKHWGL