| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3964 |
|---|
| Symbol | |
|---|
| ID | 5871758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4408249 |
|---|
| End bp | 4409520 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549086 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_001670190 |
|---|
| Protein GI | 167034959 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACGC ACGTCATCAA GATGCCGGAC ATTGGCGAAG GCATCGCGCA GGTCGAGTTG
GTGGAATGGT TCGTCAAGGT CGGTGACATC ATCGCCGAGG ACCAGGTGGT GGCCGACGTC
ATGACCGACA AGGCCACCGT GGAAATTCCT TCGCCGGTCA GTGGCAAGGT GCTGGCCCTG
GGTGGCCAGC CCGGTGAAGT GATGGCGGTC GGTAGCGAAC TGATCCGCAT CGAAGTGGAA
GGCAGCGGCA ACCATGTGGA TACGCCACAG GCCAAGCCGG TAGACACGCC ATCGGCCCCA
GTGGCCGCCA AACCAGAACC GCAGAAAGAG ATGAAACCCG CCGCGTACCA GGCGCCCGCC
CAGCACGAAG CCGCACCCAT CGTGCCGCGC CAGCCAGGCG ATAAACCGCT GGCCTCGCCG
GCCGTGCGCA AACGCGCCTT GGATGCCGGT ATCGAACTGC GTTACGTGCA TGGCAGCGGC
CCGGCCGGGC GCATCCTGCA CGAAGACCTC GACGCCTTCA TGAGCAAGCC ACAGCGTGCT
GCCGGGCAAG CGCCGAGTGG CTATGCCAAG CGCAGCGACA GCGAGCAGGT GCCGGTGATC
GGCCTGCGCC GCAAGATCGC CCAGCGCATG CAGGACGCCA AGCGCCGGGT CGCGCATTTC
AGCTATGTGG AAGAAATCGA CGTCACCGCC CTGGAAGCCC TGCGCCAGCA ACTCAACAGC
AAGCATGGCG ATAGCCGAGG CAAGCTGACC CTGCTGCCGC TCCTGGTACG CGCCCTGGTC
GTGGCACTGC GTGACTTCCC GCAGATCAAC GCCACCTACG ACGACGAAGC ACAGATCATC
ACCCGCCATG GCGCGGTGCA TGTGGGCATC GCCACCCAAG GTGACAACGG CCTGATGGTG
CCGGTGCTGC GCCATGCCGA AGCGGGCAGC CTGTGGGCCA ATGCTGGCGA GATTTCGCGC
CTGGCCAACG CTGCGCGCAA CAACAAGGCC AGCCGTGATG AGCTGTCCGG CTCGACCATC
ACCCTGACCA GCCTCGGCGC CTTGGGCGGT ATCGTCAGCA CCCCCGTGGT CAACACCCCG
GAAGTGGCCA TCGTCGGCGT CAACCGCATG GTCGAGCGAC CAGTGGTGAT CGACGGCCAG
ATCGTCGTGC GCAAGATGAT GAACCTGTCC AGCTCGTTCG ATCACCGCGT GGTCGATGGC
ATGGACGCCG CACTGTTCAT CCAGGCCGTG CGTGGCCTGC TCGAACAACC CGCCTGCCTG
TTCGTGGAGT GA
|
|---|
| Protein sequence | MGTHVIKMPD IGEGIAQVEL VEWFVKVGDI IAEDQVVADV MTDKATVEIP SPVSGKVLAL
GGQPGEVMAV GSELIRIEVE GSGNHVDTPQ AKPVDTPSAP VAAKPEPQKE MKPAAYQAPA
QHEAAPIVPR QPGDKPLASP AVRKRALDAG IELRYVHGSG PAGRILHEDL DAFMSKPQRA
AGQAPSGYAK RSDSEQVPVI GLRRKIAQRM QDAKRRVAHF SYVEEIDVTA LEALRQQLNS
KHGDSRGKLT LLPLLVRALV VALRDFPQIN ATYDDEAQII TRHGAVHVGI ATQGDNGLMV
PVLRHAEAGS LWANAGEISR LANAARNNKA SRDELSGSTI TLTSLGALGG IVSTPVVNTP
EVAIVGVNRM VERPVVIDGQ IVVRKMMNLS SSFDHRVVDG MDAALFIQAV RGLLEQPACL
FVE
|
|---|
| |