Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3961 |
Symbol | |
ID | 5871755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4405272 |
End bp | 4405757 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641549083 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001670187 |
Protein GI | 167034956 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.537786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAC TCGATCGTAC CGATATCGGC ATTCTCAACA GCCTGCAGGA AAACGCCCGC ATCACCAACG CCGAGCTGGC ACGCTCGGTC AACCTGTCGC CCACGCCCTG TTTCAACCGG GTGCGGGCCA TGGAAGAACT GGGGGTGATC CGCCAGCAGG TGACCTTGTT GTCGCCCGAG GCGTTGGGGC TGGATGTGAA TGTGTTCATC CATGTCAGCC TGGAAAAACA GGTAGAGCAG TCGTTGCACC GCTTCGAGGA AGAAATTGCC GAACGGCCCG AGGTGATGGA GTGCTACCTG ATGACCGGGG ACCCGGATTA CCTGCTACGG GTGCTGTTGC CGAGTATCCA GGCGCTGGAG CGCTTTCTCG ACTACCTGAC CCGGTTGCCG GGGGTGGCAA ATATCCGCTC GAGTTTTGCC TTGAAACAGG TGCGCTACAA GACGGCCTTG CCGTTGCCGG CCAATGGCAT GACCTTGCGC GAATAG
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Protein sequence | MRKLDRTDIG ILNSLQENAR ITNAELARSV NLSPTPCFNR VRAMEELGVI RQQVTLLSPE ALGLDVNVFI HVSLEKQVEQ SLHRFEEEIA ERPEVMECYL MTGDPDYLLR VLLPSIQALE RFLDYLTRLP GVANIRSSFA LKQVRYKTAL PLPANGMTLR E
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