| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3960 |
|---|
| Symbol | |
|---|
| ID | 5871754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4403859 |
|---|
| End bp | 4405181 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549082 |
|---|
| Product | glutamate--putrescine ligase |
|---|
| Protein accession | YP_001670186 |
|---|
| Protein GI | 167034955 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CTCAGCTCCA GGGCATCGAT GAAATCGAAT GCGTCACCCC CGACCTCAAC
GGCGTCCCAC GCGGCAAGGT GATGACCGCC GAAGGCTTTC TTGAAGGCCG CCGCCTGCAG
ATGGCCCGTG GGGTGCTGCT GCAATGCATC ATGGGCGGCT ACCCGCCGGC GAAATTCTAC
GGCAGTGACG ACGGCGACCT GGCGTTGGTA GCCGAACCCA GCCAGGTTCA TCGCTTGCCC
TGGAGCGATG ACGGTCGCGC CCTGGCCATC TGCGATGCCA ATGAACTGGA TGGCCGGCCC
TCGGCACTGT CCACCCGGGG CCAGCTTAAG GCCGTGATCG CCCGCTACGC AGCGTTGGGT
CTGGCACCGG TAGTGGCGAC CGAGCTTGAG TTCTTCGTGT TTGCCCCCAA CAGTGACCCG
CAGCAGCCGT TCCAGCCACC GCTGGGCACC GACGGCCGCC GCGAGCTGGG CCATTCAGCG
TTCAGTGTCA GCTCCAACAA CGGCCTGCGC CCGTTCTTCA AAGAGGTGTA CCAGTGCATG
GCCGCGCTCG GCCTGCCGCG CGACACCTTC ATGCACGAAA TGGGCGTCAG CCAGTTCGAG
ATCAACTTGC TGCATGGCGA CCCGCTGCTG CTGGCCGACC AGACGTTCCT GTTCAAGCAC
CTGCTCAAGG AAGTGGCGCT CAAGCATGGG CTGACCGTGG TGTGCATGGC CAAGCCGTTG
GCGCGTACGC CTGGCAGTTC CATGCATATC CACCAGAGCC TGGTCGAGGC CAGCAGCGGG
CGTAATGTGT TCAGCGACGA GCAGGGCCTG CCGACCGATA CCTTCTACCA CTTCATCGGC
GGTTTGCAGG CGTGCATGGC CGATTTCACC GCGCTGTTCG CTCCCAACGT CAATTCCTAT
CAGCGCCTGT GCCACCCCTA TGCCTCGCCG AACAATGCCT GCTGGTCCGA GGACAACCGT
GCCGCCGGTT TGCGTATTCC GGCCAGTGCG CCGGCCGCGC GACGGGTCGA AAACCGTTTA
CCCGGTGCCG ACGCCAACCC CTACCTGGCC ATCGCCGCCA GCCTGGCCGC CGGGCTGCAC
GGCATCGAGC AGCGCCTGCA GCCGTCGCCC GCCATCCAGG GCGAGTTCGA AGTGCCCGAG
CACCTGAGCC TGCCGTGTAC CCTGCATGCA GCCCTTGAAA GGCTCAAGCG CAGCACACTG
GCACGGGAAC TGTTCGGCAG CGAGTTCATC GAAGGCTACA TCGCCAGCAA GACCCTGGAA
CTGACCGATT TCTACGATGA GATCACCCCG TGGGAGCGCC GGGTGCTGGC GGCACAGGCC
TGA
|
|---|
| Protein sequence | MSIAQLQGID EIECVTPDLN GVPRGKVMTA EGFLEGRRLQ MARGVLLQCI MGGYPPAKFY
GSDDGDLALV AEPSQVHRLP WSDDGRALAI CDANELDGRP SALSTRGQLK AVIARYAALG
LAPVVATELE FFVFAPNSDP QQPFQPPLGT DGRRELGHSA FSVSSNNGLR PFFKEVYQCM
AALGLPRDTF MHEMGVSQFE INLLHGDPLL LADQTFLFKH LLKEVALKHG LTVVCMAKPL
ARTPGSSMHI HQSLVEASSG RNVFSDEQGL PTDTFYHFIG GLQACMADFT ALFAPNVNSY
QRLCHPYASP NNACWSEDNR AAGLRIPASA PAARRVENRL PGADANPYLA IAASLAAGLH
GIEQRLQPSP AIQGEFEVPE HLSLPCTLHA ALERLKRSTL ARELFGSEFI EGYIASKTLE
LTDFYDEITP WERRVLAAQA
|
|---|
| |