Gene PputGB1_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3956 
Symbol 
ID5871750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4400627 
End bp4400941 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content64% 
IMG OID641549078 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_001670182 
Protein GI167034951 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCG ACTTCAGTCG TTTGAATAAC TCTCCGTCCG TCACGGGCGG CGTGCGCGGC 
AACACCGCGT CCGGCAGCGC CGAAAAACCG GCAGCCAGCC AGGAAGCGGC AAGTGCCACC
AGCACCAGCG GAGAAGCGGT ACACCTCAGC CAAGAGGCAC AGCAGTTGCA GAAGATCAGC
GACAAGCTGC GCGACGAGCC GGTGGTCAAC AGCGCCCGTG TGGCCCAGTT GAAACAGGCG
ATCGCCGACG GCAGCTACCA GGTCGATGCC GGCCGGGTCG CCAGCAAACT GCTCGATTTC
GAAGCCCAGC GCTGA
 
Protein sequence
MVIDFSRLNN SPSVTGGVRG NTASGSAEKP AASQEAASAT STSGEAVHLS QEAQQLQKIS 
DKLRDEPVVN SARVAQLKQA IADGSYQVDA GRVASKLLDF EAQR