Gene PputGB1_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3939 
Symbol 
ID5871733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4382849 
End bp4384300 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content57% 
IMG OID641549061 
Productflagellin domain-containing protein 
Protein accessionYP_001670165 
Protein GI167034934 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.484456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAA CTGTAAACAC CAACATTGCG TCGATCACCA CCCAGGGCAA CCTGACCAAG 
GCCAGCACTG CCCAGACCAC TTCGATGCAG CGTCTGTCCT CGGGTCTGCG CATCAACAGC
GCCAAAGATG ACGCTGCTGG CCTGCAGATC AGCAACCGTC TGACCAGCCA GATCAACGGC
CTGGGCCAGG CTGTGAAAAA CGCCAACGAC GGTATCTCGA TCGCCCAGAC CGCTGAAGGT
GCAATGCAGG CTTCGACCGA CATCCTGCAA AAAATGCGTA CCCTGGCACT GTCCTCGGCT
ACTGGCTCCC TGAGCGCCGA CGACCGTAAG TCGAACAACG ACGAATACCA GGCTCTGACC
GCGGAACTGA CCCGTATCTC GCAGACCACC ACGTTCGGTG GCCAGAAACT GCTGGACGGT
TCGTACGGCA CCAAGGCCAT CCAGGTCGGC GCCAACGCCA ACGAAACCAT CAACCTGACG
CTGGACAACG TTGCTGCTAA CAACATTGGC TCGCAGCAGG TCAAAAGCGT TGCTATCACT
CCAAGCGCTA CGGGTGTTGA CGCAGGTACT GTAACTGTGA CCGGTAACGG TCAAACCAAG
GACGTTACCG TTACTGCCGG TGATTCGGCC AAAACGATCG CTGCCAACCT CAATGGCGCT
ATCGGTGGTT TGACTGCAAC TGCAAGCACT GAAGTTCAGT TCAGTGTTGA TAAAACTGCA
ATTGCCGGCG TGACTGCTGG TCCTGCCGCC AACTTCGAGC TGACCGTTGG TAGCCAGAAA
GTATCGTTTG TTGGTGTGAC CGACACTGCT AGTCTTGCAG ACCAGCTGAA ATCTAACGCC
GCTAAGCTGG GCATCAGCGT CAACTATGAT GAATCCAACG GCGGTTCGCT TTCCGTCAAG
TCGGATACCG GCGAAAACCT GGTATTCGGT GCCGGTGACG CAGCTGCTCA AGCTGGTATC
AAGGTTAATG CCAAAGACGG TAATGGCGAG TACGCTGCTT CCGGCACTGC ACTGACCGCT
GCTGATCTGT ATGTTACCGG TGCAATTTCG CTGGATTCGG CCAAAGGCTA CTCGCTGACC
GGCGGTGGTG TAACCAAGCT GTTCTCTGCT GCTGGTACTG CAGCGACCTC GGTTAAGACT
ACTATCGCTG ACACCGACGT CACGGACGCT ACCAAGGCAC AGAACGCTCT GGCGGTTATC
GACAAGGCCA TCGGTTCGAT CGACAGCGTC CGTTCGGGCC TGGGTGCTAC TCAGAACCGT
CTGCAAACCA CCGTCGACAA CCTGCAGAAC ATCCAGAAGA ACTCCACCGC TGCTCGCTCC
ACCGTGCAGG ACGTGGACTT CGCCTCGGAA ACTGCCGAGC TGACCAAGCA GCAGACTCTG
CAACAGGCTT CGACTGCAAT CCTGTCGCAG GCTAACCAGC TGCCATCCTC GGTCCTGAAA
CTGCTCCAGT AA
 
Protein sequence
MALTVNTNIA SITTQGNLTK ASTAQTTSMQ RLSSGLRINS AKDDAAGLQI SNRLTSQING 
LGQAVKNAND GISIAQTAEG AMQASTDILQ KMRTLALSSA TGSLSADDRK SNNDEYQALT
AELTRISQTT TFGGQKLLDG SYGTKAIQVG ANANETINLT LDNVAANNIG SQQVKSVAIT
PSATGVDAGT VTVTGNGQTK DVTVTAGDSA KTIAANLNGA IGGLTATAST EVQFSVDKTA
IAGVTAGPAA NFELTVGSQK VSFVGVTDTA SLADQLKSNA AKLGISVNYD ESNGGSLSVK
SDTGENLVFG AGDAAAQAGI KVNAKDGNGE YAASGTALTA ADLYVTGAIS LDSAKGYSLT
GGGVTKLFSA AGTAATSVKT TIADTDVTDA TKAQNALAVI DKAIGSIDSV RSGLGATQNR
LQTTVDNLQN IQKNSTAARS TVQDVDFASE TAELTKQQTL QQASTAILSQ ANQLPSSVLK
LLQ