Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3939 |
Symbol | |
ID | 5871733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4382849 |
End bp | 4384300 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641549061 |
Product | flagellin domain-containing protein |
Protein accession | YP_001670165 |
Protein GI | 167034934 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.484456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAA CTGTAAACAC CAACATTGCG TCGATCACCA CCCAGGGCAA CCTGACCAAG GCCAGCACTG CCCAGACCAC TTCGATGCAG CGTCTGTCCT CGGGTCTGCG CATCAACAGC GCCAAAGATG ACGCTGCTGG CCTGCAGATC AGCAACCGTC TGACCAGCCA GATCAACGGC CTGGGCCAGG CTGTGAAAAA CGCCAACGAC GGTATCTCGA TCGCCCAGAC CGCTGAAGGT GCAATGCAGG CTTCGACCGA CATCCTGCAA AAAATGCGTA CCCTGGCACT GTCCTCGGCT ACTGGCTCCC TGAGCGCCGA CGACCGTAAG TCGAACAACG ACGAATACCA GGCTCTGACC GCGGAACTGA CCCGTATCTC GCAGACCACC ACGTTCGGTG GCCAGAAACT GCTGGACGGT TCGTACGGCA CCAAGGCCAT CCAGGTCGGC GCCAACGCCA ACGAAACCAT CAACCTGACG CTGGACAACG TTGCTGCTAA CAACATTGGC TCGCAGCAGG TCAAAAGCGT TGCTATCACT CCAAGCGCTA CGGGTGTTGA CGCAGGTACT GTAACTGTGA CCGGTAACGG TCAAACCAAG GACGTTACCG TTACTGCCGG TGATTCGGCC AAAACGATCG CTGCCAACCT CAATGGCGCT ATCGGTGGTT TGACTGCAAC TGCAAGCACT GAAGTTCAGT TCAGTGTTGA TAAAACTGCA ATTGCCGGCG TGACTGCTGG TCCTGCCGCC AACTTCGAGC TGACCGTTGG TAGCCAGAAA GTATCGTTTG TTGGTGTGAC CGACACTGCT AGTCTTGCAG ACCAGCTGAA ATCTAACGCC GCTAAGCTGG GCATCAGCGT CAACTATGAT GAATCCAACG GCGGTTCGCT TTCCGTCAAG TCGGATACCG GCGAAAACCT GGTATTCGGT GCCGGTGACG CAGCTGCTCA AGCTGGTATC AAGGTTAATG CCAAAGACGG TAATGGCGAG TACGCTGCTT CCGGCACTGC ACTGACCGCT GCTGATCTGT ATGTTACCGG TGCAATTTCG CTGGATTCGG CCAAAGGCTA CTCGCTGACC GGCGGTGGTG TAACCAAGCT GTTCTCTGCT GCTGGTACTG CAGCGACCTC GGTTAAGACT ACTATCGCTG ACACCGACGT CACGGACGCT ACCAAGGCAC AGAACGCTCT GGCGGTTATC GACAAGGCCA TCGGTTCGAT CGACAGCGTC CGTTCGGGCC TGGGTGCTAC TCAGAACCGT CTGCAAACCA CCGTCGACAA CCTGCAGAAC ATCCAGAAGA ACTCCACCGC TGCTCGCTCC ACCGTGCAGG ACGTGGACTT CGCCTCGGAA ACTGCCGAGC TGACCAAGCA GCAGACTCTG CAACAGGCTT CGACTGCAAT CCTGTCGCAG GCTAACCAGC TGCCATCCTC GGTCCTGAAA CTGCTCCAGT AA
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Protein sequence | MALTVNTNIA SITTQGNLTK ASTAQTTSMQ RLSSGLRINS AKDDAAGLQI SNRLTSQING LGQAVKNAND GISIAQTAEG AMQASTDILQ KMRTLALSSA TGSLSADDRK SNNDEYQALT AELTRISQTT TFGGQKLLDG SYGTKAIQVG ANANETINLT LDNVAANNIG SQQVKSVAIT PSATGVDAGT VTVTGNGQTK DVTVTAGDSA KTIAANLNGA IGGLTATAST EVQFSVDKTA IAGVTAGPAA NFELTVGSQK VSFVGVTDTA SLADQLKSNA AKLGISVNYD ESNGGSLSVK SDTGENLVFG AGDAAAQAGI KVNAKDGNGE YAASGTALTA ADLYVTGAIS LDSAKGYSLT GGGVTKLFSA AGTAATSVKT TIADTDVTDA TKAQNALAVI DKAIGSIDSV RSGLGATQNR LQTTVDNLQN IQKNSTAARS TVQDVDFASE TAELTKQQTL QQASTAILSQ ANQLPSSVLK LLQ
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