Gene PputGB1_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3918 
Symbol 
ID5871712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4363390 
End bp4363824 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content68% 
IMG OID641549040 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_001670144 
Protein GI167034913 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCC TCGCGGCACT AGCGGCGCTG CTTGGCAGCC ACGCCTGCCT GGCTGCGGCT 
ACGCCAGCGG CGACCCCGGT AGCGGCACCT GGCAGCCTCG GCGGGCAGCT GGCGCAGATG
GTCTTCGGCC TGCTGTTGGT CGTTGGCCTG ATCTTCTTTC TGGCCTGGCT GCTGCGGCGC
CTGCAGAGCA CGGCGGTGAA GGGCGGGCAG GTGATCGAGA TTGTCGGCAG CCGTGCCATC
GGCCCGCGTG ACCGCCTGCT GTTGGTGCAG GTGGGCAAGG AGCAGATCCT GATCGGCCAT
ACCCCCGGCA GCATCGAGGC GCTGCATGTG CTGGCCGAAC CCGTGGAAGT ACCGGCAAGC
GCCCGTCAGG CGGCGCCGGA GTTTGCCCAG CGGTTGATGG AGCTGATGGG CAAGGACCCT
AAGGACAACA AGTGA
 
Protein sequence
MRALAALAAL LGSHACLAAA TPAATPVAAP GSLGGQLAQM VFGLLLVVGL IFFLAWLLRR 
LQSTAVKGGQ VIEIVGSRAI GPRDRLLLVQ VGKEQILIGH TPGSIEALHV LAEPVEVPAS
ARQAAPEFAQ RLMELMGKDP KDNK