Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3917 |
Symbol | fliP |
ID | 5871711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4362635 |
End bp | 4363390 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549039 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_001670143 |
Protein GI | 167034912 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG CGCTGCGTAC GATGTTGACT CTGGCGCTGC TGCTGGCCGC GCCGCTGGCC CTGGCCGCCG ACCCGCTGTC GATCCCGGCC ATTACGCTGT CCAATACCGC GGACGGGCAG CAGGAGTATT CGGTCAGCCT GCAAATCCTG CTGATCATGA CGGCGCTGAG CTTCATCCCG GCGTTCGTCA TCCTGATGAC CAGCTTCACC CGCATCATCA TCGTGTTCTC GATCCTGCGT CAGGCCCTGG GCCTGCAGCA GACGCCATCG AACCAGTTGC TCACCGGCAT GGCGCTGTTT CTGACCATGT TCATCATGGC CCCGGTGTTC GACCGGGTGA ACCAGGACGC CCTGCAGCCT TACCTGAAGG AGCAGATGAC GGCCCAGCAG GCCATCGACA AGGCCCAGGG GCCGCTCAAG GACTTCATGC TGGCGCAAAC CCGGCAAAGC GACCTCGACC TGTTCATGCG CCTGTCCAAG CGTACCGACA TCGCCGGCCC CGACCAGGTG CCGCTGACCA TCCTGGTGCC AGCGTTCGTC ACCTCCGAGT TGAAGACGGC GTTCCAGATC GGTTTCATGA TTTTCATCCC GTTCCTGATC ATCGACATGG TGGTGGCCAG TGTGCTGATG GCCATGGGTA TGATGATGCT GTCGCCGCTG ATCATCTCGC TGCCGTTCAA GATCATGCTG TTCGTGCTGG TGGATGGCTG GGCGCTGATC ATGGGCACCC TGGCCAGCAG TTTCGGCGGC GTCTGA
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Protein sequence | MSGALRTMLT LALLLAAPLA LAADPLSIPA ITLSNTADGQ QEYSVSLQIL LIMTALSFIP AFVILMTSFT RIIIVFSILR QALGLQQTPS NQLLTGMALF LTMFIMAPVF DRVNQDALQP YLKEQMTAQQ AIDKAQGPLK DFMLAQTRQS DLDLFMRLSK RTDIAGPDQV PLTILVPAFV TSELKTAFQI GFMIFIPFLI IDMVVASVLM AMGMMMLSPL IISLPFKIML FVLVDGWALI MGTLASSFGG V
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