Gene PputGB1_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3917 
SymbolfliP 
ID5871711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4362635 
End bp4363390 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID641549039 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_001670143 
Protein GI167034912 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CGCTGCGTAC GATGTTGACT CTGGCGCTGC TGCTGGCCGC GCCGCTGGCC 
CTGGCCGCCG ACCCGCTGTC GATCCCGGCC ATTACGCTGT CCAATACCGC GGACGGGCAG
CAGGAGTATT CGGTCAGCCT GCAAATCCTG CTGATCATGA CGGCGCTGAG CTTCATCCCG
GCGTTCGTCA TCCTGATGAC CAGCTTCACC CGCATCATCA TCGTGTTCTC GATCCTGCGT
CAGGCCCTGG GCCTGCAGCA GACGCCATCG AACCAGTTGC TCACCGGCAT GGCGCTGTTT
CTGACCATGT TCATCATGGC CCCGGTGTTC GACCGGGTGA ACCAGGACGC CCTGCAGCCT
TACCTGAAGG AGCAGATGAC GGCCCAGCAG GCCATCGACA AGGCCCAGGG GCCGCTCAAG
GACTTCATGC TGGCGCAAAC CCGGCAAAGC GACCTCGACC TGTTCATGCG CCTGTCCAAG
CGTACCGACA TCGCCGGCCC CGACCAGGTG CCGCTGACCA TCCTGGTGCC AGCGTTCGTC
ACCTCCGAGT TGAAGACGGC GTTCCAGATC GGTTTCATGA TTTTCATCCC GTTCCTGATC
ATCGACATGG TGGTGGCCAG TGTGCTGATG GCCATGGGTA TGATGATGCT GTCGCCGCTG
ATCATCTCGC TGCCGTTCAA GATCATGCTG TTCGTGCTGG TGGATGGCTG GGCGCTGATC
ATGGGCACCC TGGCCAGCAG TTTCGGCGGC GTCTGA
 
Protein sequence
MSGALRTMLT LALLLAAPLA LAADPLSIPA ITLSNTADGQ QEYSVSLQIL LIMTALSFIP 
AFVILMTSFT RIIIVFSILR QALGLQQTPS NQLLTGMALF LTMFIMAPVF DRVNQDALQP
YLKEQMTAQQ AIDKAQGPLK DFMLAQTRQS DLDLFMRLSK RTDIAGPDQV PLTILVPAFV
TSELKTAFQI GFMIFIPFLI IDMVVASVLM AMGMMMLSPL IISLPFKIML FVLVDGWALI
MGTLASSFGG V