Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3909 |
Symbol | |
ID | 5871703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4354679 |
End bp | 4355065 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641549031 |
Product | response regulator receiver protein |
Protein accession | YP_001670135 |
Protein GI | 167034904 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.947385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAAGA ACATGAAAAT CCTCATCGTT GACGACTTTT CGACGATGCG GCGGATCATC AAGAACCTGT TGCGTGACCT GGGCTTCACC AACACCGAAG AGGCCGATGA CGGCACCACG GCGCTGCCGA TGCTGGAGAA CGGCCACTAC GACTTCCTGG TGACCGACTG GAACATGCCG GGCATGTCCG GCATCGACCT GCTGCGTAAA GTGCGTGCCA GCGAAAAGCT GAAAAGCATG CCGGTACTGA TGGTGACCGC CGAAGCCAAG CGCGACCAGA TCATCGAAGC GGCCCAGGCC GGCGTCAATG GTTACGTGGT CAAGCCGTTC ACCGCTCAGG TGCTCAAAGA AAAGATCGAG AAGATCTTCG AACGCGTCAA CGGCTGA
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Protein sequence | MDKNMKILIV DDFSTMRRII KNLLRDLGFT NTEEADDGTT ALPMLENGHY DFLVTDWNMP GMSGIDLLRK VRASEKLKSM PVLMVTAEAK RDQIIEAAQA GVNGYVVKPF TAQVLKEKIE KIFERVNG
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