Gene PputGB1_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3908 
Symbol 
ID5871702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4353870 
End bp4354658 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content59% 
IMG OID641549030 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_001670134 
Protein GI167034903 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.925973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT CACAAACCTC TTTGGGCGAG TTCGAATCGA CCCTGAAGAA GCATGCCCAG 
GAGTTGGTCG AAAGCCTGGA GCGGGGCCGT TTCGGCGAGG CGGTGCAGCT GATTCACGAG
CTGAACCAAA CCCGCGATCG CGGCCTGTAC CAGGAAGTGG GCAAGCTGAC CCGCGAGCTG
CACAGCGCCA TCGTCAGTTT CCAGATCGAC CCGACCATGC CGCAGGCTGA GGAGGTGTCG
CAGATTACCG ACGCCACCGA GCGCTTGTCG TACGTGGTCA AGCTGACCGA AGGCGCGGCC
AACCGCACCA TGGACCTGGT CGAGGAAAGC ACCCCGGTGC TCAACGACCT GGCAAGCGAG
GCCAAGGCCT TGAGTACCGA CTGGCAACGC TTCATGCGCC GCGAAGTGGC TGCGCCGGAA
TTCCGTGACC TGGTCAAGCG TGTCGACAGT TTCCTGACGC ACAGCGCCGA AGGTAACCGC
AAGGTCGCCG GCCACCTCAA CGACATTTTG CTGGCTCAGG ACTATCAGGA CCTGACCGGC
CAGGTGATCA AACGCGTTAC CAGCCTGGTA ACCGAAGTGG AAAGCAACCT GCTGAAACTG
GTGCTGATGG CCAGCCAAGT TGATCGTTTT GCAGGCATTC AGCATGACCA CGATCAATTG
CGCGCAGAAA AAGATCGAGA AAAACATCCG ACTCGGGGTG AAGGTCCGCA GATTCATGCC
GATAAGCGTG AAGACGTCGT GTCCGGTCAG GACGATGTCG ATGATCTGCT GTCCAGCCTG
GGTTTTTAA
 
Protein sequence
MDSSQTSLGE FESTLKKHAQ ELVESLERGR FGEAVQLIHE LNQTRDRGLY QEVGKLTREL 
HSAIVSFQID PTMPQAEEVS QITDATERLS YVVKLTEGAA NRTMDLVEES TPVLNDLASE
AKALSTDWQR FMRREVAAPE FRDLVKRVDS FLTHSAEGNR KVAGHLNDIL LAQDYQDLTG
QVIKRVTSLV TEVESNLLKL VLMASQVDRF AGIQHDHDQL RAEKDREKHP TRGEGPQIHA
DKREDVVSGQ DDVDDLLSSL GF