Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3908 |
Symbol | |
ID | 5871702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4353870 |
End bp | 4354658 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641549030 |
Product | chemotaxis phosphatase, CheZ |
Protein accession | YP_001670134 |
Protein GI | 167034903 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG3143] Chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.925973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCAT CACAAACCTC TTTGGGCGAG TTCGAATCGA CCCTGAAGAA GCATGCCCAG GAGTTGGTCG AAAGCCTGGA GCGGGGCCGT TTCGGCGAGG CGGTGCAGCT GATTCACGAG CTGAACCAAA CCCGCGATCG CGGCCTGTAC CAGGAAGTGG GCAAGCTGAC CCGCGAGCTG CACAGCGCCA TCGTCAGTTT CCAGATCGAC CCGACCATGC CGCAGGCTGA GGAGGTGTCG CAGATTACCG ACGCCACCGA GCGCTTGTCG TACGTGGTCA AGCTGACCGA AGGCGCGGCC AACCGCACCA TGGACCTGGT CGAGGAAAGC ACCCCGGTGC TCAACGACCT GGCAAGCGAG GCCAAGGCCT TGAGTACCGA CTGGCAACGC TTCATGCGCC GCGAAGTGGC TGCGCCGGAA TTCCGTGACC TGGTCAAGCG TGTCGACAGT TTCCTGACGC ACAGCGCCGA AGGTAACCGC AAGGTCGCCG GCCACCTCAA CGACATTTTG CTGGCTCAGG ACTATCAGGA CCTGACCGGC CAGGTGATCA AACGCGTTAC CAGCCTGGTA ACCGAAGTGG AAAGCAACCT GCTGAAACTG GTGCTGATGG CCAGCCAAGT TGATCGTTTT GCAGGCATTC AGCATGACCA CGATCAATTG CGCGCAGAAA AAGATCGAGA AAAACATCCG ACTCGGGGTG AAGGTCCGCA GATTCATGCC GATAAGCGTG AAGACGTCGT GTCCGGTCAG GACGATGTCG ATGATCTGCT GTCCAGCCTG GGTTTTTAA
|
Protein sequence | MDSSQTSLGE FESTLKKHAQ ELVESLERGR FGEAVQLIHE LNQTRDRGLY QEVGKLTREL HSAIVSFQID PTMPQAEEVS QITDATERLS YVVKLTEGAA NRTMDLVEES TPVLNDLASE AKALSTDWQR FMRREVAAPE FRDLVKRVDS FLTHSAEGNR KVAGHLNDIL LAQDYQDLTG QVIKRVTSLV TEVESNLLKL VLMASQVDRF AGIQHDHDQL RAEKDREKHP TRGEGPQIHA DKREDVVSGQ DDVDDLLSSL GF
|
| |