| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3905 |
|---|
| Symbol | motC |
|---|
| ID | 5871699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4349709 |
|---|
| End bp | 4350449 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641549027 |
|---|
| Product | flagellar motor protein |
|---|
| Protein accession | YP_001670131 |
|---|
| Protein GI | 167034900 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1291] Flagellar motor component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.448269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCC TCAGCCTGAT CGGCCTGATC CTCGCGTTTG TTGCCATCGT CGGGGGCAAC
TTCCTCGAAG GCGGCCATGT CGGTGCCCTG ATCAATGGCC CGGCGGCACT GATCGTGCTG
GGCGGCACCC TGGCGGCGGC GTTGCTGCAG TCGCCACTGT CGTCGTTCAA GCGCGCCTTG
CAGATTTTGC GCTGGATTCT CTTTCCGCCA CGGGTTGACC TGGCGGGCGG TATCGATCGC
GTGGTGAACT GGAGCTTGAC CGCGCGCAAG GAAGGCCTGC TCGGCCTGGA AAGCGTGGCC
GACAGCGAGC CCGACCCGTA TGCGCGCAAG GGCCTGCAGC TGCTGGTGGA TGGCGCCGAG
CCAGAAGCCA TCCGCAGCAT TCTTGAAGTC GACTTTCTGA CCCAGGAAGC CCGTGACATC
CAGGCTGCCA AGGTGTTCGA GAGCATGGGC GGCTACGCGC CAACCATCGG CATCATCGGT
GCGGTGATGG GCCTTATCCA CGTGATGGGC AACCTGGCTG ACCCGTCCCA GCTGGGCAAC
GGTATTGCCG TGGCCTTCGT CGCCACTATC TACGGCGTGG CCAGCGCCAA CCTGATCCTG
CTGCCGATTG CCAACAAGCT CAAGGCCAAC GTGATGCGCC AGTCGCGCTA CCGCGAGATG
CTGCTCGAAG GCTTGTTGTC GATTGCCGAG GGTGAAAACC CGCGCTCGAT CGAGCTGAAG
CTGCAAGGCT TCATGGAGTA A
|
|---|
| Protein sequence | MDVLSLIGLI LAFVAIVGGN FLEGGHVGAL INGPAALIVL GGTLAAALLQ SPLSSFKRAL
QILRWILFPP RVDLAGGIDR VVNWSLTARK EGLLGLESVA DSEPDPYARK GLQLLVDGAE
PEAIRSILEV DFLTQEARDI QAAKVFESMG GYAPTIGIIG AVMGLIHVMG NLADPSQLGN
GIAVAFVATI YGVASANLIL LPIANKLKAN VMRQSRYREM LLEGLLSIAE GENPRSIELK
LQGFME
|
|---|
| |