| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3893 |
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| Symbol | |
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| ID | 5871687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4338917 |
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| End bp | 4339093 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549015 |
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| Product | heme exporter protein CcmD |
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| Protein accession | YP_001670119 |
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| Protein GI | 167034888 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00817898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTG CCACCTTCGG TGACTTTCTC GCCATGGGCC ACCATGGCCT GTACGTGTGG
TCGGCCTATG GCATCTGCCT GGCGGTGCTG GCGCTGAATG TCGCCGCGCC ACTGCTGGCT
CGCCGTCGCT ACCTGCAAGA AGAGGCGCGC CGTTTGCGCC GGGAGAACAA CCAGTGA
|
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| Protein sequence | MSFATFGDFL AMGHHGLYVW SAYGICLAVL ALNVAAPLLA RRRYLQEEAR RLRRENNQ
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