Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3886 |
Symbol | |
ID | 5871680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4332841 |
End bp | 4333770 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641549008 |
Product | hypothetical protein |
Protein accession | YP_001670112 |
Protein GI | 167034881 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.709154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC TGACACTCCT CCTTGTAGCA TTGACCTTGA CGGCATGCAC TCAAACCCAA ATCAAACCCT ATCAACACAC GCCAGTGGAT GGGGCGGCAA CGGCTCAGGC CTTGAACGCC AGGTATATCG ATGATCGGCA GAATTGTGGG AATACCAGTA TCCCTTCATT TCTCTGTAGT GGCGTAATAC TTCGGGCAAC TACGTATTCA ACCAGCTACG ATCCTTGGGA TGCCAGCCCA GCCGCACAAC AAAAAGACGG CGTGTCATTT TCCTACTTAC GCAAAGATGC CAAATTCGCT CGATTGGCCT ACGCGCTGAC AAATGGCTTC ATTTTTTACC CCATTTTTGA CATACCCCCC GACAAGATAA AACTGGAGGT ATTCTGTGCA TTCGTTATCG ACGGCTGGAC GAACGACAGG CCCGATCACG GATGTGGCGC AACCCCGGGA TTCGCTGTCA GCAAGCCATG CCACGAGAGC GGTATTCTCA CCGCCAGCGA CTGGCAGAAT CACTATCGGG ACGTTGGGGG CGTGAGCCAG CGCTTATGTG GCTTCAATGT GCGTGACAGC GCCAATGATC ATGCCGGCCC GTCGTTTTAC CAAGCGCTGC AGGCAAAGAG CACCGGCAGC TTGGCCGAAA CGCTGTTCAC CCAGCAGAAC GAAATTGTCA TCAAGTCATG GACGGACGAT GTGGATGGCG GCTTACCCAT ACAAGCATTC TTCTATTTGA AAGACAGTGC CAGTGGTTTG GCCGAAGCCC AAGACATCAA GCGACGTTTT CTCGCCAAGA CAGGAATCGA TGTTCCACTG ATCCGGCTCA CCCTGCCAAG TCTCAGCAGC CAGGACGCCC ATTTCGATTA CATATCAGAC GACAACAGAA AAGCTTCACC TGTGCCAGCA TGCCCATCCG GTCTGGCACC TTGCAGCTGA
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Protein sequence | MKTLTLLLVA LTLTACTQTQ IKPYQHTPVD GAATAQALNA RYIDDRQNCG NTSIPSFLCS GVILRATTYS TSYDPWDASP AAQQKDGVSF SYLRKDAKFA RLAYALTNGF IFYPIFDIPP DKIKLEVFCA FVIDGWTNDR PDHGCGATPG FAVSKPCHES GILTASDWQN HYRDVGGVSQ RLCGFNVRDS ANDHAGPSFY QALQAKSTGS LAETLFTQQN EIVIKSWTDD VDGGLPIQAF FYLKDSASGL AEAQDIKRRF LAKTGIDVPL IRLTLPSLSS QDAHFDYISD DNRKASPVPA CPSGLAPCS
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